From Pyrococcus sp. GB-D (aliases:Deep Vent)
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Welcome to the Polymerase Page

This page presents all the information in Polbase for PGBD Pol I.


At the top of the page you'll find a map of all positions of known mutants. Text links to mutants and digestion products are listed in the Mutants section.


If available, a representative structure is displayed at the upper right. All known structures are listed in the Structures section.

External links:

Polbase polymerases are linked to UniProt and Genbank where possible. The UniProt search link directs you to a pre-constructed UniProt search containing relevant terms.


All references that refer to this Polymerase are listed with their topics and paper's title in the References table.


All the results for this polymerase can be examined by following the "Results" link at the bottom of the page.

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PGBD Pol I is a family B enzyme from Pyrococcus sp. GB-D.

Selected Properties for PGBD Pol I:

3'-5' exo activity 5'-3' exo activity Frameshift Rate Substitution Rate General Error Rate
Yes (3) No (1) no data no data 2.7e-06 errors/bp (1)
Year Authors Title Results by property
2009 Md Monsur Ali, Shuhei Imoto, Yingqian Li, Shigeki Sasaki, Fumi Nagatsugi Incorporation of an inducible nucleot...
2009 Noriaki Minakawa, Shintaro Ogata, Mayumi Takahashi, Akira Matsuda Unnatural imidazopyridopyrimidine:nap...
2005 Jon P Anderson, Bernhard Angerer, Lawrence A Loeb Incorporation of reporter-labeled nuc... Cloned or native,Tagged,Full length or truncated,3-5' exo,5-3' exo,Application name,All properties
2002 Andrew F Gardner, William E Jack Acyclic and dideoxy terminator prefer...
2002 Tadayuki Imanaka, Haruyuki Atomi Catalyzing "hot" reactions: enzymes f... Vmax,All properties
2001 Holly H Hogrefe, J Cline, A E Lovejoy, K B Nielson DNA polymerases from hyperthermophiles. Strand Displacement,3-5' exo,5-3' exo,KM,3-5' Exo Specific Activity,Overall Error Rate,All properties
1996 Hao Huang, P Keohavong Fidelity and predominant mutations pr... 3-5' exo,All properties
1994 Wayne M Barnes PCR amplification of up to 35-kb DNA ...
1992 H W Jannasch, C O Wirsen, S J Molyneaux, T A Langworthy Comparative Physiological Studies on ...
Protein sequence:
Name 3'-5' exo activity 5'-3' exo activity Frameshift Rate Substitution Rate General Error Rate
Deep Vent (exo-) No (1)

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