From Pyrococcus sp. GB-D (aliases:Deep Vent)
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Welcome to the Polymerase Page

This page presents all the information in Polbase for PGBD Pol I.


At the top of the page you'll find a map of all positions of known mutants. Text links to mutants and digestion products are listed in the Mutants section.


If available, a representative structure is displayed at the upper right. All known structures are listed in the Structures section.

External links:

Polbase polymerases are linked to UniProt and Genbank where possible. The UniProt search link directs you to a pre-constructed UniProt search containing relevant terms.


All references that refer to this Polymerase are listed with their topics and paper's title in the References table.


All the results for this polymerase can be examined by following the "Results" link at the bottom of the page.

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PGBD Pol I is a family B enzyme from Pyrococcus sp. GB-D.

Selected Properties for PGBD Pol I:

3'-5' exo activity 5'-3' exo activity Frameshift Rate Substitution Rate General Error Rate
Yes (3) No (1) no data no data 2.7e-06 errors/bp (1)
Year Authors Title Results by property
2009 Md Monsur Ali, Shuhei Imoto, Yingqian Li, Shigeki Sasaki, Fumi Nagatsugi Ali MM2009
2009 Noriaki Minakawa, Shintaro Ogata, Mayumi Takahashi, Akira Matsuda Minakawa N2009
2005 Jon P Anderson, Bernhard Angerer, Lawrence A Loeb Anderson JP2005 Cloned or native,Tagged,Full length or truncated,3-5' exo,5-3' exo,Application name,All properties
2002 Andrew F Gardner, William E Jack Gardner AF2002
2002 Tadayuki Imanaka, Haruyuki Atomi Imanaka T2002 Vmax,All properties
2001 Holly H Hogrefe, J Cline, A E Lovejoy, K B Nielson Hogrefe HH2001 Strand Displacement,3-5' exo,5-3' exo,KM,3-5' Exo Specific Activity,Overall Error Rate,All properties
1996 Hao Huang, P Keohavong Huang H1996 3-5' exo,All properties
1994 Wayne M Barnes Barnes WM1994
1992 H W Jannasch, C O Wirsen, S J Molyneaux, T A Langworthy Jannasch HW1992
Protein sequence:
DNA sequence:
Name 3'-5' exo activity 5'-3' exo activity Frameshift Rate Substitution Rate General Error Rate
Deep Vent (exo-) No (1)
All Polymerases | 15 Results

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