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Ishino Y

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Publications:

Title Authors Year Journal
Architecture of the DNA polymerase B-proliferating cell nuclear antigen (PCNA)-DNA ternary complex. Ishino Y 2011 Proceedings of the National Academy of Sciences of the United States of America
Molecular analyses of an unusual translesion DNA polymerase from Methanosarcina acetivorans C2A. Ishino Y 2010 Journal of molecular biology
Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm. Ishino Y 2009 BMC structural biology
Molecular analyses of a three-subunit euryarchaeal clamp loader complex from Methanosarcina acetivorans. Ishino Y 2009 Journal of bacteriology
Biochemical properties and base excision repair complex formation of apurinic/apyrimidinic endonuclease from Pyrococcus furiosus. Ishino Y 2009 Nucleic acids research
Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex. Ishino Y 2009 Proceedings of the National Academy of Sciences of the United States of America
A useful strategy to construct DNA polymerases with different properties by using genetic resources from environmental DNA. Ishino Y 2009 Genes & genetic systems
Crystallization and preliminary crystallographic study of DNA polymerase from Pyrococcus furiosus. Ishino Y 2007 Protein Pept Lett
Specific interactions of three proliferating cell nuclear antigens with replication-related proteins in Aeropyrum pernix. Ishino Y 2007 Molecular microbiology
Genomewide and biochemical analyses of DNA-binding activity of Cdc6/Orc1 and Mcm proteins in Pyrococcus sp. Ishino Y 2007 Nucleic acids research
Comprehensive search for DNA polymerase in the hyperthermophilic archaeon, Pyrococcus furiosus. Ishino Y 2006 Nucleosides, nucleotides & nucleic acids
Stoichiometric complex formation by proliferating cell nuclear antigen (PCNA) and its interacting protein: purification and crystallization of the DNA polymerase and PCNA monomer mutant complex from Pyrococcus furiosus. Ishino Y 2006 Acta Crystallogr Sect F Struct Biol Cryst Commun
Crystal structure and functional implications of Pyrococcus furiosus hef helicase domain involved in branched DNA processing. Ishino Y 2005 Structure (London, England : 1993)
Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis. Ishino Y 2005 Proceedings of the National Academy of Sciences of the United States of America
Role of the Escherichia coli RecQ DNA helicase in SOS signaling and genome stabilization at stalled replication forks. Ishino Y 2004 Genes & development
The clamp-loading complex for processive DNA replication. Ishino Y 2004 Nature structural & molecular biology
Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA. Ishino Y 2003 Protein science : a publication of the Protein Society
Physical interaction between proliferating cell nuclear antigen and replication factor C from Pyrococcus furiosus. Ishino Y 2002 Genes to cells : devoted to molecular & cellular mechanisms
Archaeal primase: bridging the gap between RNA and DNA polymerases. Ishino Y 2001 Current biology : CB
Three-dimensional electron microscopy of the clamp loader small subunit from Pyrococcus furiosus. Ishino Y 2001 Journal of structural biology
The archaeal DNA primase: biochemical characterization of the p41-p46 complex from Pyrococcus furiosus. Ishino Y 2001 The Journal of biological chemistry
Functional interactions of an archaeal sliding clamp with mammalian clamp loader and DNA polymerase delta. Ishino Y 2001 Genes Cells
Functional interdependence of DNA polymerizing and 3'-->5' exonucleolytic activities in Pyrococcus furiosus DNA polymerase I. Ishino Y 2000 Protein Eng
Functional interactions of a homolog of proliferating cell nuclear antigen with DNA polymerases in Archaea. Ishino Y 1999 J Bacteriol
Two family B DNA polymerases from Aeropyrum pernix, an aerobic hyperthermophilic crenarchaeote. Ishino Y 1999 J Bacteriol
Archaeal DNA replication: identifying the pieces to solve a puzzle. Ishino Y 1999 Genetics
Specific interaction between DNA polymerase II (PolD) and RadB, a Rad51/Dmc1 homolog, in Pyrococcus furiosus. Ishino Y 1999 Nucleic acids research
A heterodimeric DNA polymerase: evidence that members of Euryarchaeota possess a distinct DNA polymerase. Ishino Y 1998 Proceedings of the National Academy of Sciences of the United States of America
The euryarchaeotes, a subdomain of Archaea, survive on a single DNA polymerase: fact or farce? Ishino Y 1998 Genes Genet Syst
A novel DNA polymerase family found in Archaea. Ishino Y 1998 J Bacteriol
A novel DNA polymerase in the hyperthermophilic archaeon, Pyrococcus furiosus: gene cloning, expression, and characterization. Ishino Y 1997 Genes Cells
The amino acid sequence required for 5' --> 3' exonuclease activity of Bacillus caldotenax DNA polymerase. Ishino Y 1995 Protein Eng
The hyperthermophilic archaeon Pyrodictium occultum has two alpha-like DNA polymerases. Ishino Y 1995 Journal of bacteriology
A non-alpha-like DNA polymerase from the hyperthermophilic archaeon Pyrococcus furiosus. Ishino Y 1995 Biol Pharm Bull
Overproduction of Thermus aquaticus DNA polymerase and its structural analysis by ion-spray mass spectrometry. Ishino Y 1994 J Biochem
Amino acid sequence motifs essential to 3'-->5' exonuclease activity of Escherichia coli DNA polymerase II. Ishino Y 1994 The Journal of biological chemistry
Organization and nucleotide sequence of the DNA polymerase gene from the archaeon Pyrococcus furiosus. Ishino Y 1993 Nucleic acids research
Cloning of the DNA polymerase gene of Bacillus caldotenax and characterization of the gene product. Ishino Y 1993 J Biochem
Aphidicolin inhibits DNA polymerizing activity but not nucleolytic activity of Escherichia coli DNA polymerase II. Ishino Y 1992 Biochimie
SOS-inducible DNA polymerase II of E coli is homologous to replicative DNA polymerase of eukaryotes. Ishino Y 1991 Biochimie
Escherichia coli DNA polymerase II is homologous to alpha-like DNA polymerases. Ishino Y 1991 Mol Gen Genet
[Methods of DNA sequencing with Taq DNA polymerase]. Ishino Y 1990 Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme
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