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Ishino Y

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Publications:

Title Authors Year Journal
Architecture of the DNA polymerase B-proliferating cell nuclear antigen (PCNA)-DNA ternary complex. Ishino Y 2011 Proceedings of the National Academy of Sciences of the United States of America
Molecular analyses of an unusual translesion DNA polymerase from Methanosarcina acetivorans C2A. Ishino Y 2010 Journal of molecular biology
Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex. Ishino Y 2009 Proceedings of the National Academy of Sciences of the United States of America
Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm. Ishino Y 2009 BMC structural biology
Molecular analyses of a three-subunit euryarchaeal clamp loader complex from Methanosarcina acetivorans. Ishino Y 2009 Journal of bacteriology
A useful strategy to construct DNA polymerases with different properties by using genetic resources from environmental DNA. Ishino Y 2009 Genes & genetic systems
Biochemical properties and base excision repair complex formation of apurinic/apyrimidinic endonuclease from Pyrococcus furiosus. Ishino Y 2009 Nucleic acids research
Crystallization and preliminary crystallographic study of DNA polymerase from Pyrococcus furiosus. Ishino Y 2007 Protein Pept Lett
Specific interactions of three proliferating cell nuclear antigens with replication-related proteins in Aeropyrum pernix. Ishino Y 2007 Molecular microbiology
Genomewide and biochemical analyses of DNA-binding activity of Cdc6/Orc1 and Mcm proteins in Pyrococcus sp. Ishino Y 2007 Nucleic acids research
Stoichiometric complex formation by proliferating cell nuclear antigen (PCNA) and its interacting protein: purification and crystallization of the DNA polymerase and PCNA monomer mutant complex from Pyrococcus furiosus. Ishino Y 2006 Acta Crystallogr Sect F Struct Biol Cryst Commun
Comprehensive search for DNA polymerase in the hyperthermophilic archaeon, Pyrococcus furiosus. Ishino Y 2006 Nucleosides, nucleotides & nucleic acids
Crystal structure and functional implications of Pyrococcus furiosus hef helicase domain involved in branched DNA processing. Ishino Y 2005 Structure (London, England : 1993)
Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis. Ishino Y 2005 Proceedings of the National Academy of Sciences of the United States of America
The clamp-loading complex for processive DNA replication. Ishino Y 2004 Nature structural & molecular biology
Role of the Escherichia coli RecQ DNA helicase in SOS signaling and genome stabilization at stalled replication forks. Ishino Y 2004 Genes & development
Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA. Ishino Y 2003 Protein science : a publication of the Protein Society
Physical interaction between proliferating cell nuclear antigen and replication factor C from Pyrococcus furiosus. Ishino Y 2002 Genes to cells : devoted to molecular & cellular mechanisms
Functional interactions of an archaeal sliding clamp with mammalian clamp loader and DNA polymerase delta. Ishino Y 2001 Genes Cells
The archaeal DNA primase: biochemical characterization of the p41-p46 complex from Pyrococcus furiosus. Ishino Y 2001 The Journal of biological chemistry
Three-dimensional electron microscopy of the clamp loader small subunit from Pyrococcus furiosus. Ishino Y 2001 Journal of structural biology
Archaeal primase: bridging the gap between RNA and DNA polymerases. Ishino Y 2001 Current biology : CB
Functional interdependence of DNA polymerizing and 3'-->5' exonucleolytic activities in Pyrococcus furiosus DNA polymerase I. Ishino Y 2000 Protein Eng
Archaeal DNA replication: identifying the pieces to solve a puzzle. Ishino Y 1999 Genetics
Functional interactions of a homolog of proliferating cell nuclear antigen with DNA polymerases in Archaea. Ishino Y 1999 J Bacteriol
Two family B DNA polymerases from Aeropyrum pernix, an aerobic hyperthermophilic crenarchaeote. Ishino Y 1999 J Bacteriol
Specific interaction between DNA polymerase II (PolD) and RadB, a Rad51/Dmc1 homolog, in Pyrococcus furiosus. Ishino Y 1999 Nucleic acids research
A novel DNA polymerase family found in Archaea. Ishino Y 1998 J Bacteriol
A heterodimeric DNA polymerase: evidence that members of Euryarchaeota possess a distinct DNA polymerase. Ishino Y 1998 Proceedings of the National Academy of Sciences of the United States of America
The euryarchaeotes, a subdomain of Archaea, survive on a single DNA polymerase: fact or farce? Ishino Y 1998 Genes Genet Syst
A novel DNA polymerase in the hyperthermophilic archaeon, Pyrococcus furiosus: gene cloning, expression, and characterization. Ishino Y 1997 Genes Cells
The amino acid sequence required for 5' --> 3' exonuclease activity of Bacillus caldotenax DNA polymerase. Ishino Y 1995 Protein Eng
The hyperthermophilic archaeon Pyrodictium occultum has two alpha-like DNA polymerases. Ishino Y 1995 Journal of bacteriology
A non-alpha-like DNA polymerase from the hyperthermophilic archaeon Pyrococcus furiosus. Ishino Y 1995 Biol Pharm Bull
Amino acid sequence motifs essential to 3'-->5' exonuclease activity of Escherichia coli DNA polymerase II. Ishino Y 1994 The Journal of biological chemistry
Overproduction of Thermus aquaticus DNA polymerase and its structural analysis by ion-spray mass spectrometry. Ishino Y 1994 J Biochem
Cloning of the DNA polymerase gene of Bacillus caldotenax and characterization of the gene product. Ishino Y 1993 J Biochem
Organization and nucleotide sequence of the DNA polymerase gene from the archaeon Pyrococcus furiosus. Ishino Y 1993 Nucleic acids research
Aphidicolin inhibits DNA polymerizing activity but not nucleolytic activity of Escherichia coli DNA polymerase II. Ishino Y 1992 Biochimie
SOS-inducible DNA polymerase II of E coli is homologous to replicative DNA polymerase of eukaryotes. Ishino Y 1991 Biochimie
Escherichia coli DNA polymerase II is homologous to alpha-like DNA polymerases. Ishino Y 1991 Mol Gen Genet
[Methods of DNA sequencing with Taq DNA polymerase]. Ishino Y 1990 Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme

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