Structure (London, England : 1993)

(Structure) ISSNs: 0969-2126, 1878-4186

References in Structure (London, England : 1993):

Title Authors Year
Magnesium-induced assembly of a complete DNA polymerase catalytic complex. Batra VK, Beard WA, Shock DD, Krahn JM, Pedersen LC, Wilson SH 2006
The structure of HIV-1 reverse transcriptase complexed with 9-chloro-TIBO: lessons for inhibitor design. Ren J, Esnouf R, Hopkins A, Ross C, Jones Y, Stammers D, Stuart DI 1995
The UmuD' protein filament and its potential role in damage induced mutagenesis. Peat TS, Frank EG, McDonald JP, Levine AS, Woodgate R, Hendrickson WA 1996
2.2 A resolution structure of the amino-terminal half of HIV-1 reverse transcriptase (fingers and palm subdomains). Unge T, Knight S, Bhikhabhai R, Lövgren S, Dauter Z, Wilson K, Strandberg B 1994
An open and closed case for all polymerases. Doublié S, Sawaya MR, Ellenberger T 1999
Comparison of three different crystal forms shows HIV-1 reverse transcriptase displays an internal swivel motion. Jäger J, Smerdon SJ, Wang J, Boisvert DC, Steitz TA 1994
Structure of DNA polymerase beta with the mutagenic DNA lesion 8-oxodeoxyguanine reveals structural insights into its coding potential. Krahn JM, Beard WA, Miller H, Grollman AP, Wilson SH 2003
Hold tight (but not too tight) to get it right: accurate bypass of an 8-oxoguanine lesion by DNA polymerase beta. Brieba LG, Ellenberger T 2003
A ring to bind eukaryotic DNA polymerase. von Hippel PH 1995
Structural insights into the origins of DNA polymerase fidelity. Beard WA, Wilson SH 2003
Structure of HIV-1 reverse transcriptase with the inhibitor beta-Thujaplicinol bound at the RNase H active site. Himmel DM, Maegley KA, Pauly TA, Bauman JD, Das K, Dharia C, Clark AD, Ryan K, Hickey MJ, Love RA, Hughes SH, Bergqvist S, Arnold E 2009
DNA lesion bypass polymerases open up. Beard WA, Wilson SH 2001
Phage like it HOT: solution structure of the bacteriophage P1-encoded HOT protein, a homolog of the theta subunit of E. coli DNA polymerase III. DeRose EF, Kirby TW, Mueller GA, Chikova AK, Schaaper RM, London RE 2004
The human cytomegalovirus UL44 C clamp wraps around DNA. Komazin-Meredith G, Petrella RJ, Santos WL, Filman DJ, Hogle JM, Verdine GL, Karplus M, Coen DM 2008
Human DNA polymerase iota incorporates dCTP opposite template G via a G.C + Hoogsteen base pair. Nair DT, Johnson RE, Prakash L, Prakash S, Aggarwal AK 2005
The crystal structure of the monomeric reverse transcriptase from Moloney murine leukemia virus. Das D, Georgiadis MM 2004
A lysine residue in the fingers subdomain of T7 DNA polymerase modulates the miscoding potential of 8-oxo-7,8-dihydroguanosine. Brieba LG, Kokoska RJ, Bebenek K, Kunkel TA, Ellenberger T 2005
Structural and thermodynamic analysis of human PCNA with peptides derived from DNA polymerase-delta p66 subunit and flap endonuclease-1. Bruning JB, Shamoo Y 2004
Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases. Rechkoblit O, Malinina L, Cheng Y, Geacintov NE, Broyde S, Patel DJ 2009
Replication across template T/U by human DNA polymerase-iota. Jain R, Nair DT, Johnson RE, Prakash L, Prakash S, Aggarwal AK 2009
Processivity of DNA polymerases: two mechanisms, one goal. Kelman Z, Hurwitz J, O'Donnell ME 1998
Crystal structure of an archaebacterial DNA polymerase. Zhao Y, Jeruzalmi D, Moarefi I, Leighton L, Lasken R, Kuriyan J 1999
Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 A resolution. Kiefer JR, Mao C, Hansen CJ, Basehore SL, Hogrefe HH, Braman JC, Beese LS 1997
Structure of unliganded HIV-1 reverse transcriptase at 2.7 A resolution: implications of conformational changes for polymerization and inhibition mechanisms. Hsiou Y, Ding J, Das K, Clark AD, Hughes SH, Arnold E 1996
Structure of HIV-1 reverse transcriptase in a complex with the non-nucleoside inhibitor alpha-APA R 95845 at 2.8 A resolution. Ding J, Das K, Tantillo C, Zhang W, Clark AD, Jessen S, Lu X, Hsiou Y, Jacobo-Molina A, Andries K 1995
Structural basis for error-free replication of oxidatively damaged DNA by yeast DNA polymerase eta. Silverstein TD, Jain R, Johnson RE, Prakash L, Prakash S, Aggarwal AK 2010
Structural basis for proofreading during replication of the Escherichia coli chromosome. Hamdan SM, Carr PD, Brown SE, Ollis DL, Dixon NE 2002
Nucleotide-induced conformational changes in an isolated Escherichia coli DNA polymerase III clamp loader subunit. Podobnik M, Weitze TF, O'Donnell ME, Kuriyan J 2003
DNA synthesis across an abasic lesion by human DNA polymerase iota. Nair DT, Johnson RE, Prakash L, Prakash S, Aggarwal AK 2009
The mechanism of the translocation step in DNA replication by DNA polymerase I: a computer simulation analysis. Golosov AA, Warren JJ, Beese LS, Karplus M 2010
An incoming nucleotide imposes an anti to syn conformational change on the templating purine in the human DNA polymerase-iota active site. Nair DT, Johnson RE, Prakash L, Prakash S, Aggarwal AK 2006
Structural basis for the resilience of efavirenz (DMP-266) to drug resistance mutations in HIV-1 reverse transcriptase. Ren J, Milton J, Weaver KL, Short SA, Stuart DI, Stammers DK 2000
Structural insights into DNA polymerase beta deterrents for misincorporation support an induced-fit mechanism for fidelity. Krahn JM, Beard WA, Wilson SH 2004
Nucleotide-induced DNA polymerase active site motions accommodating a mutagenic DNA intermediate. Batra VK, Beard WA, Shock DD, Pedersen LC, Wilson SH 2005
Protein-template-directed synthesis across an acrolein-derived DNA adduct by yeast Rev1 DNA polymerase. Nair DT, Johnson RE, Prakash L, Prakash S, Aggarwal AK 2008
Syn-full behavior by T7 DNA polymerase. Beard WA, Wilson SH 2005
Mapping of the interaction interface of DNA polymerase beta with XRCC1. Gryk MR, Marintchev A, Maciejewski MW, Robertson A, Wilson SH, Mullen GP 2002
Structure of the RNA-binding domain of telomerase: implications for RNA recognition and binding. Rouda S, Skordalakes E 2007
Insights into DNA replication: the crystal structure of DNA polymerase B1 from the archaeon Sulfolobus solfataricus. Savino C, Federici L, Johnson KA, Vallone B, Nastopoulos V, Rossi M, Pisani FM, Tsernoglou D 2004
How conformational dynamics of DNA polymerase select correct substrates: experiments and simulations. Kirmizialtin S, Nguyen V, Johnson KA, Elber R 2012
Crystal structure and functional implications of Pyrococcus furiosus hef helicase domain involved in branched DNA processing. Nishino T, Komori K, Tsuchiya D, Ishino Y, Morikawa K 2005
Structures of dNTP Intermediate States during DNA Polymerase Active Site Assembly. Freudenthal BD, Beard WA, Wilson SH 2012
A single subunit directs the assembly of the Escherichia coli DNA sliding clamp loader. Park AY, Jergic S, Politis A, Ruotolo BT, Hirshberg D, Jessop LL, Beck JL, Barsky D, O'Donnell ME, Dixon NE, Robinson CV 2010
Crystal structure of the catalytic core of human DNA polymerase kappa. Uljon SN, Johnson RE, Edwards TA, Prakash S, Prakash L, Aggarwal AK 2004

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