The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity.
EMBO reports (2000), Volume 1, Page 484
Abstract:
The recent discovery of a new family of ubiquitous DNA polymerases involved in translesion synthesis has shed new light onto the biochemical basis of mutagenesis. Among these polymerases, the dinB gene product (Pol IV) is involved in mutagenesis in Escherichia coli. We show here that the activity of native Pol IV is drastically modified upon interaction with the beta subunit, the processivity factor of DNA Pol III. In the absence of the beta subunit Pol IV is strictly distributive and no stable complex between Pol IV and DNA could be detected. In contrast, the beta clamp allows Pol IV to form a stable initiation complex (t 1/2 approximately 2.3 min), which leads to a dramatic increase in the processivity of PoI IV reaching an average of 300-400 nucleotides. In vivo, the beta processivity subunit may target DNA Pol IV to its substrate, generating synthesis tracks much longer than previously thought.
Polymerases:
Topics:
Historical Protein Properties (MW, pI, ...), Modulators/Inhibitors, Kinetic Parameters, Nucleotide Incorporation, Source / Purification
Status:
new | topics/pols set | partial results | complete | validated |
Results:
Polymerase | Reference | Property | Result | Context |
---|---|---|---|---|
Eco Pol IV | The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. | Molecular Weight | 3.95E+04 Dalton | |
Eco Pol IV | The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. | 3-5' Exonuclease (proofreading) | No | |
Eco Pol IV | The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. | Cloned or native | Native organism | |
Eco Pol IV | The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. | Full length or truncated | Full length | |
Eco Pol IV | The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. | Processivity | 400bp | |
Eco Pol IV | The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. | Vmax | 0.3 /minute | Reaction: Nucleotide incorporation; Substrate: dNTPs |