Eco Pol IV
From
E. coli
Welcome to the Polymerase Page
This page presents all the information in Polbase for Eco Pol IV.
Mutants:At the top of the page you'll find a map of all positions of known mutants. Text links to mutants and digestion products are listed in the Mutants section.
Structures/Sequence:If available, a representative structure is displayed at the upper right. All known structures are listed in the Structures section.
External links:Polbase polymerases are linked to UniProt and Genbank where possible. The UniProt search link directs you to a pre-constructed UniProt search containing relevant terms.
References:All references that refer to this Polymerase are listed with their topics and paper's title in the References table.
Results:All the results for this polymerase can be examined by following the "Results" link at the bottom of the page.
Help icons:
The symbol in the upper-right corner of the page
links to this help text. The question mark icon is used everywhere to indicate that help is available.
Eco Pol IV
is a family Y enzyme
from
E. coli.
Selected Properties for Eco Pol IV: |
3'-5' exo activity | 5'-3' exo activity | Frameshift Rate | Substitution Rate | General Error Rate |
|---|---|---|---|---|---|
| No (2) | no data | 2.1e-04 errors/bp (1) | 5.1e-05 errors/bp (1) | 3.0e-02-3.6e-02 errors/bp (2) |
- References (42)
- Structures (1)
- Sequences (1)
- Mutants (0)...
- Formulations (0)
- Polymerase Lots (0)
- External links
| Year | Authors | Title | Results by property |
|---|---|---|---|
| Damian Gawel, Patrick C Seed | Urinary tract infection drives genome... | ||
| 2013 | Chiara Indiani, Meghna Patel, Myron F Goodman, Mike E O'Donnell | RecA acts as a switch to regulate pol... | |
| 2013 | Amit Sharma, J Kottur, N Narayanan, Deepak T Nair | A strategically located serine residu... | |
| 2013 | Richard T Pomerantz, Isabel Kurth, Myron F Goodman, Mike E O'Donnell | Preferential D-loop extension by a tr... | |
| 2013 | Christopher H Corzett, Myron F Goodman, Steven E Finkel | Competitive Fitness during Feast and ... | |
| 2013 | Richard T Pomerantz, Myron F Goodman, Michael E O'Donnell | DNA polymerases are error-prone at Re... | |
| 2012 | Justin M H Heltzel, Robert W Maul, David W Wolff, Mark D Sutton | Escherichia coli DNA polymerase IV (P... | |
| 2012 | Asako Furukohri, Yoshito Nishikawa, Masahiro Tatsumi Akiyama, Hisaji Maki | Interaction between Escherichia coli ... | |
| 2011 | Kinrin Yamanaka, Irina G Minko, Steven E Finkel, Myron F Goodman, R Stephen Lloyd | Role of high-fidelity Escherichia col... | |
| 2010 | Mark D Sutton | Coordinating DNA polymerase traffic d... | |
| 2009 | Karolina Makiela-Dzbenska, Malgorzata Jaszczur, Magdalena Banach-Orlowska, Piotr Jonczyk, Roel M Schaaper, I Fijalkowska | Role of Escherichia coli DNA polymera... | |
| 2009 | Rodrigo S Galhardo, Robert Do, Masami Yamada, Errol C Friedberg, P J Hastings, Takehiko Nohmi, Susan M Rosenberg | DinB upregulation is the sole role of... | |
| 2009 | Jérôme E Wagner, Hélène Etienne, Robert P P Fuchs, Agnes M Cordonnier, Dominique Y Burnouf | Distinct beta-clamp interactions gove... | |
| 2009 | Justin M H Heltzel, Robert W Maul, Sarah K Scouten Ponticelli, Mark D Sutton | A model for DNA polymerase switching ... | |
| 2008 | Anuradha Kumari, Irina G Minko, Michael B Harbut, Steven E Finkel, Myron F Goodman, R Stephen Lloyd | Replication bypass of interstrand cro... | |
| 2008 | Asako Furukohri, Myron F Goodman, Hisaji Maki | A dynamic polymerase exchange with Es... | |
| 2007 | Kimberly D Jacob, Kristin A Eckert | Escherichia coli DNA polymerase IV co... | |
| 2007 | Adam P Silverman, Qingfei Jiang, Myron F Goodman, Eric T Kool | Steric and electrostatic effects in D... | |
| 2006 | Chiu Hong Lee, Sushil Chandani, Edward L Loechler | Homology modeling of four Y-family, l... | |
| 2006 | Masami Yamada, Tatsuo Nunoshiba, Masatomi Shimizu, Petr Gruz, Hiroyuki Kamiya, Hideyoshi Harashima, Takehiko Nohmi | Involvement of Y-family DNA polymeras... | |
| 2006 | Keiko Matsui, Masami Yamada, Masaru Imai, Kazuo Yamamoto, Takehiko Nohmi | Specificity of replicative and SOS-in... | |
| 2005 | Kazuya Satou, Masami Yamada, Takehiko Nohmi, Hideyoshi Harashima, Hiroyuki Kamiya | Mutagenesis induced by oxidized DNA p... | |
| 2005 | Xuan Shen, Roger Woodgate, Myron F Goodman | Lyase activities intrinsic to Escheri... | |
| 2005 | Jill C Layton, Patricia L Foster | Error-prone DNA polymerase IV is regu... | |
| 2004 | Brian S Plosky, Roger Woodgate | Switching from high-fidelity replicas... | |
| 2004 | Wojciech Kuban, Piotr Jonczyk, Damian Gawel, Karolina Malanowska, Roel M Schaaper, I Fijalkowska | Role of Escherichia coli DNA polymera... | |
| 2004 | Dominique Y Burnouf, Vincent Olieric, Jérôme E Wagner, Shingo Fujii, J Reinbolt, Robert P P Fuchs, Philippe Dumas | Structural and biochemical analysis o... | |
| 2003 | Joshua D Tompkins, Jennifer L Nelson, Jill C Hazel, Stacy L Leugers, Jeffrey D Stumpf, Patricia L Foster | Error-prone polymerase, DNA polymeras... | |
| 2003 | Karen A Bunting, S Mark Roe, Laurence H Pearl | Structural basis for recruitment of t... | |
| 2003 | Ayelet Maor-Shoshani, Kiyoshi Hayashi, Haruo Ohmori, Zvi Livneh | Analysis of translesion replication a... | |
| 2002 | Sawami Kobayashi, Michael R Valentine, Phuong Pham, Mike E O'Donnell, Myron F Goodman | Fidelity of Escherichia coli DNA poly... | Cloned or native,Full length or truncated,Processivity,Gap fill,Frameshift Error Rate,Nucleotide Substitution Rate,Overall Error Rate,All properties |
| 2002 | Naomi Suzuki, Eiji Ohashi, Alexander Kolbanovskiy, Nicholas E Geacintov, Arthur P Grollman, Haruo Ohmori, Shinya Shibutani | Translesion synthesis by human DNA po... | |
| 2001 | Su-Ryang Kim, Keiko Matsui, Masami Yamada, Petr Gruz, Takehiko Nohmi | Roles of chromosomal and episomal din... | |
| 2001 | Naomi Suzuki, Eiji Ohashi, Kiyoshi Hayashi, Haruo Ohmori, Arthur P Grollman, Shinya Shibutani | Translesional synthesis past acetylam... | |
| 2000 | Jérôme E Wagner, Shingo Fujii, Petr Grúz, Takehiko Nohmi, Robert P P Fuchs | The beta clamp targets DNA polymerase... | Cloned or native,Full length or truncated,Processivity,3-5' exo,Molecular Weight,Vmax,All properties |
| 2000 | Yongqing Zhang, Fenghua Yuan, Hongkui Xin, Xiaoming Wu, D K Rajpal, D Yang, Zhengqiang Wang | Human DNA polymerase kappa synthesize... | |
| 2000 | Jérôme E Wagner, Takehiko Nohmi | Escherichia coli DNA polymerase IV mu... | |
| 1999 | Jérôme E Wagner, Petr Grúz, Su-Ryang Kim, Masami Yamada, Keiko Matsui, Robert P P Fuchs, Takehiko Nohmi | The dinB gene encodes a novel E. coli... | Cloned or native,Tagged,Tag Name,Full length or truncated,Processivity,3-5' exo,Molecular Weight,All properties |
| 1999 | M Tang, Xuan Shen, Ekaterina G Frank, Mike E O'Donnell, Roger Woodgate, Myron F Goodman | UmuD'(2)C is an error-prone DNA polym... | |
| 1999 | Valerie L Gerlach, L Aravind, G Gotway, R A Schultz, Eugene V Koonin, Errol C Friedberg | Human and mouse homologs of Escherich... | |
| 1988 | Hisaji Maki, Satoko Maki, Arthur Kornberg | DNA Polymerase III holoenzyme of Esch... | |
| 1964 | Charles C Richardson, C L SCHILDKRAUT, H V APOSHIAN, Arthur Kornberg | ENZYMATIC SYNTHESIS OF DEOXYRIBONUCLE... |
Protein sequence:
Protein information: Uniprot Q47155 search for Eco Pol IV at UniProt
Sequence information: NCBI nucleotides European nucleotide archive