Eco Pol V
From
E. coli
(aliases:umu C, umuC, pol X, umuD+umuC)
Welcome to the Polymerase Page
This page presents all the information in Polbase for Eco Pol V.
Mutants:At the top of the page you'll find a map of all positions of known mutants. Text links to mutants and digestion products are listed in the Mutants section.
Structures/Sequence:If available, a representative structure is displayed at the upper right. All known structures are listed in the Structures section.
External links:Polbase polymerases are linked to UniProt and Genbank where possible. The UniProt search link directs you to a pre-constructed UniProt search containing relevant terms.
References:All references that refer to this Polymerase are listed with their topics and paper's title in the References table.
Results:All the results for this polymerase can be examined by following the "Results" link at the bottom of the page.
Help icons:
The symbol in the upper-right corner of the page
links to this help text. The question mark icon is used everywhere to indicate that help is available.
Eco Pol V
is a family Y enzyme
from
E. coli.
Needs support for multiple subunits uniprot links for complete representation
Selected Properties for Eco Pol V: |
3'-5' exo activity | 5'-3' exo activity | Frameshift Rate | Substitution Rate | General Error Rate |
|---|---|---|---|---|---|
| no data | no data | 2.3e-05 errors/bp (1) | 1.9e-04 errors/bp (1) | 2.3e-02 errors/bp (1) |
- References (40)
- Structures (0)
- Sequences (1)
- Mutants (3)...
- Formulations (0)
- Polymerase Lots (0)
- External links
| Year | Authors | Title | Results by property |
|---|---|---|---|
| 2013 | Sushil Chandani, Edward L Loechler | Structural model of the Y-Family DNA ... | |
| 2013 | Christopher H Corzett, Myron F Goodman, Steven E Finkel | Competitive Fitness during Feast and ... | |
| 2013 | Chiara Indiani, Meghna Patel, Myron F Goodman, Mike E O'Donnell | RecA acts as a switch to regulate pol... | |
| 2013 | Alexandra Vaisman, John P McDonald, Donald Huston, Wojciech Kuban, Lili Liu, Bennett Van Houten, Roger Woodgate | Removal of misincorporated ribonucleo... | Incorporation of non-standard nucleotides,All properties |
| 2013 | Atif A Patoli, Jody A Winter, Karen A Bunting | The UmuC subunit of the E. coli DNA p... | |
| 2013 | John Ernest V Bajacan, Marc M Greenberg | DNA polymerase V kinetics support the... | |
| 2012 | Kiyonobu Karata, Alexandra Vaisman, Myron F Goodman, Roger Woodgate | Simple and efficient purification of ... | |
| 2012 | Wojciech Kuban, Alexandra Vaisman, John P McDonald, Kiyonobu Karata, Wei Wen Yang, Myron F Goodman, Roger Woodgate | Escherichia coli UmuC active site mut... | |
| 2012 | Alexandra Vaisman, Wojciech Kuban, John P McDonald, Kiyonobu Karata, Wei Wen Yang, Myron F Goodman, Roger Woodgate | Critical amino acids in Escherichia c... | |
| 2011 | Charles S McHenry | Breaking the rules: bacteria that use... | |
| 2011 | Kinrin Yamanaka, Irina G Minko, Steven E Finkel, Myron F Goodman, R Stephen Lloyd | Role of high-fidelity Escherichia col... | |
| 2010 | Mark D Sutton | Coordinating DNA polymerase traffic d... | |
| 2009 | Kwang Young Seo, Jun Yin, Prashant Donthamsetti, Sushil Chandani, Chui Hong Lee, Edward L Loechler | Amino acid architecture that influenc... | |
| 2009 | Qingfei Jiang, Kiyonobu Karata, Roger Woodgate, Michael M Cox, Myron F Goodman | The active form of DNA polymerase V i... | |
| 2009 | Karolina Makiela-Dzbenska, Malgorzata Jaszczur, Magdalena Banach-Orlowska, Piotr Jonczyk, Roel M Schaaper, I Fijalkowska | Role of Escherichia coli DNA polymera... | |
| 2008 | Anuradha Kumari, Irina G Minko, Michael B Harbut, Steven E Finkel, Myron F Goodman, R Stephen Lloyd | Replication bypass of interstrand cro... | |
| 2006 | Chiu Hong Lee, Sushil Chandani, Edward L Loechler | Homology modeling of four Y-family, l... | |
| 2006 | Katharina Schlacher, Qingfei Jiang, Roger Woodgate, Myron F Goodman | Purification and characterization of ... | |
| 2005 | Kazuya Satou, Masami Yamada, Takehiko Nohmi, Hideyoshi Harashima, Hiroyuki Kamiya | Mutagenesis induced by oxidized DNA p... | |
| 2003 | Karen A Bunting, S Mark Roe, Laurence H Pearl | Structural basis for recruitment of t... | |
| 2003 | Xuan Shen, Roger Woodgate, Myron F Goodman | Escherichia coli DNA polymerase V sub... | |
| 2002 | Mark D Sutton, Issay Narumi, Graham C Walker | Posttranslational modification of the... | |
| 2002 | Naomi Suzuki, Eiji Ohashi, Alexander Kolbanovskiy, Nicholas E Geacintov, Arthur P Grollman, Haruo Ohmori, Shinya Shibutani | Translesion synthesis by human DNA po... | |
| 2002 | Ayelet Maor-Shoshani, Zvi Livneh | Analysis of the stimulation of DNA po... | |
| 2001 | N B Reuven, Gali Arad, A Z Stasiak, A Stasiak, Zvi Livneh | Lesion bypass by the Escherichia coli... | |
| 2001 | Naomi Suzuki, Eiji Ohashi, Kiyoshi Hayashi, Haruo Ohmori, Arthur P Grollman, Shinya Shibutani | Translesional synthesis past acetylam... | |
| 2001 | Su-Ryang Kim, Keiko Matsui, Masami Yamada, Petr Gruz, Takehiko Nohmi | Roles of chromosomal and episomal din... | |
| 2000 | T V Rao, M T Haber, Jane M Sayer, Donald M Jerina | Incorporation of 4-thiothymidine into... | |
| 2000 | Myron F Goodman, Roger Woodgate | The biochemical basis and in vivo reg... | |
| 2000 | Ayelet Maor-Shoshani, N B Reuven, Guy Tomer, Zvi Livneh | Highly mutagenic replication by DNA p... | Tagged,Tag Name,Full length or truncated,Gap fill,Frameshift Error Rate,Nucleotide Substitution Rate,Other accessory protein(s),Overall Error Rate,All properties |
| 1999 | M Tang, Xuan Shen, Ekaterina G Frank, Mike E O'Donnell, Roger Woodgate, Myron F Goodman | UmuD'(2)C is an error-prone DNA polym... | |
| 1999 | N B Reuven, Gali Arad, Ayelet Maor-Shoshani, Zvi Livneh | The mutagenesis protein UmuC is a DNA... | Nucleotide incorporation accessory protein(s),All properties |
| 1999 | Jérôme E Wagner, Petr Grúz, Su-Ryang Kim, Masami Yamada, Keiko Matsui, Robert P P Fuchs, Takehiko Nohmi | The dinB gene encodes a novel E. coli... | |
| 1998 | Olga I Lavrik, Heinz Peter Nasheuer, Klaus Weisshart, M S Wold, Rajendra Prasad, William A Beard, Samuel H Wilson, Alain Favre | Subunits of human replication protein... | |
| 1990 | T Ohnishi, S Yuba, T Date, H Utsumi, Akio Matsukage | Rat DNA polymerase beta gene can join... | |
| 1988 | Hisaji Maki, Satoko Maki, Arthur Kornberg | DNA Polymerase III holoenzyme of Esch... | |
| 1988 | C A Bonner, S K Randall, C Rayssiguier, Miroslav Radman, R Eritja, B E Kaplan, K McEntee, Myron F Goodman | Purification and characterization of ... | Cloned or native,Full length or truncated,Molecular Weight,All properties |
| 1987 | Ulrich Hübscher, M Gassmann, Silvio Spadari, Neal C Brown, Elena Ferrari, H J Buhk | Mammalian DNA polymerase alpha: a rep... | |
| 1981 | C Upton, R J Pinney | Absence of ultraviolet-inducible DNA ... | |
| 1964 | Charles C Richardson, C L SCHILDKRAUT, H V APOSHIAN, Arthur Kornberg | ENZYMATIC SYNTHESIS OF DEOXYRIBONUCLE... |
Protein sequence:
| Name | 3'-5' exo activity | 5'-3' exo activity | Frameshift Rate | Substitution Rate | General Error Rate |
|---|---|---|---|---|---|
| Eco Pol V F10L | |||||
| Eco Pol V Y11A | |||||
| Eco Pol V Y11F |
Protein information: Uniprot C2DS31 search for Eco Pol V at UniProt
Sequence information: NCBI nucleotides European nucleotide archive