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Salas M

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Publications:

Title Authors Year Journal
Cloning and expression of gene 2, required for the protein-primed initiation of the Bacillus subtilis phage phi 29 DNA replication. Salas M Gene
Dual Role of φ29 DNA Polymerase Lys529 in Stabilisation of the DNA Priming-Terminus and the Terminal Protein-Priming Residue at the Polymerisation Site. Salas M 2013 PloS one
New insights in the ϕ29 terminal protein DNA-binding and host nucleoid localization functions. Salas M 2013 Molecular microbiology
Disclosing the in vivo organization of a viral histone-like protein in Bacillus subtilis mediated by its capacity to recognize the viral genome. Salas M 2012 Proceedings of the National Academy of Sciences of the United States of America
Active DNA unwinding dynamics during processive DNA replication. Salas M 2012 Proceedings of the National Academy of Sciences of the United States of America
My life with bacteriophage O29. Salas M 2012 The Journal of biological chemistry
The essential role of the 3' terminal template base in the first steps of protein-primed DNA replication. Salas M 2012 PloS one
DNA stabilization at the Bacillus subtilis PolX core--a binding model to coordinate polymerase, AP-endonuclease and 3'-5' exonuclease activities. Salas M 2012 Nucleic acids research
Terminal protein-primed amplification of heterologous DNA with a minimal replication system based on phage {Phi}29. Salas M 2011 Proceedings of the National Academy of Sciences of the United States of America
Involvement of residues of the 29 terminal protein intermediate and priming domains in the formation of a stable and functional heterodimer with the replicative DNA polymerase. Salas M 2011 Nucleic acids research
Improvement of phi29 DNA polymerase amplification performance by fusion of DNA binding motifs. Salas M 2010 Proceedings of the National Academy of Sciences of the United States of America
Intrinsic apurinic/apyrimidinic (AP) endonuclease activity enables Bacillus subtilis DNA polymerase X to recognize, incise, and further repair abasic sites. Salas M 2010 Proceedings of the National Academy of Sciences of the United States of America
phi29 DNA polymerase active site: role of residue Val250 as metal-dNTP complex ligand and in protein-primed initiation. Salas M 2010 Journal of molecular biology
Viral terminal protein directs early organization of phage DNA replication at the bacterial nucleoid. Salas M 2010 Proceedings of the National Academy of Sciences of the United States of America
Proofreading dynamics of a processive DNA polymerase. Salas M 2009 The EMBO journal
A passion for research. Salas M 2009 Cellular and molecular life sciences : CMLS
Involvement of the TPR2 subdomain movement in the activities of phi29 DNA polymerase. Salas M 2009 Nucleic acids research
Functional importance of bacteriophage phi29 DNA polymerase residue Tyr148 in primer-terminus stabilisation at the 3'-5' exonuclease active site. Salas M 2009 Journal of molecular biology
Editing of misaligned 3'-termini by an intrinsic 3'-5' exonuclease activity residing in the PHP domain of a family X DNA polymerase. Salas M 2008 Nucleic acids research
Phage phi29 protein p56 prevents viral DNA replication impairment caused by uracil excision activity of uracil-DNA glycosylase. Salas M 2008 Proceedings of the National Academy of Sciences of the United States of America
Characterization of a Bacillus subtilis 64-kDa DNA polymerase X potentially involved in DNA repair. Salas M 2008 Journal of molecular biology
Phage phi29 and Nf terminal protein-priming domain specifies the internal template nucleotide to initiate DNA replication. Salas M 2008 Proceedings of the National Academy of Sciences of the United States of America
The bacteriophage phi29 DNA polymerase. Salas M 2008 IUBMB Life
Enzymatic synthesis of structure-free DNA with pseudo-complementary properties. Salas M 2008 Nucleic acids research
Involvement of phage phi29 DNA polymerase and terminal protein subdomains in conferring specificity during initiation of protein-primed DNA replication. Salas M 2007 Nucleic acids research
Structures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B-family polymerases. Salas M 2007 The EMBO journal
A highly conserved Tyrosine residue of family B DNA polymerases contributes to dictate translesion synthesis past 8-oxo-7,8-dihydro-2'-deoxyguanosine. Salas M 2007 Nucleic acids research
40 years with bacteriophage ø29. Salas M 2007 Annual review of microbiology
The phi29 DNA polymerase:protein-primer structure suggests a model for the initiation to elongation transition. Salas M 2006 The EMBO journal
Functional characterization of highly processive protein-primed DNA polymerases from phages Nf and GA-1, endowed with a potent strand displacement capacity. Salas M 2006 Nucleic acids research
Involvement of phi29 DNA polymerase thumb subdomain in the proper coordination of synthesis and degradation during DNA replication. Salas M 2006 Nucleic acids research
Structure of the functional domain of phi29 replication organizer: insights into oligomerization and dna binding. Salas M 2005 The Journal of biological chemistry
Involvement of the "linker" region between the exonuclease and polymerization domains of phi29 DNA polymerase in DNA and TP binding. Salas M 2005 Gene
A specific subdomain in phi29 DNA polymerase confers both processivity and strand-displacement capacity. Salas M 2005 Proceedings of the National Academy of Sciences of the United States of America
Function of the C-terminus of phi29 DNA polymerase in DNA and terminal protein binding. Salas M 2004 Nucleic acids research
Insights into strand displacement and processivity from the crystal structure of the protein-primed DNA polymerase of bacteriophage phi29. Salas M 2004 Molecular cell
Two positively charged residues of phi29 DNA polymerase, conserved in protein-primed DNA polymerases, are involved in stabilisation of the incoming nucleotide. Salas M 2004 Journal of molecular biology
Binding of phage Phi29 architectural protein p6 to the viral genome: evidence for topological restriction of the phage linear DNA. Salas M 2004 Nucleic acids research
phi29 DNA polymerase-terminal protein interaction. Involvement of residues specifically conserved among protein-primed DNA polymerases. Salas M 2004 Journal of molecular biology
A conserved insertion in protein-primed DNA polymerases is involved in primer terminus stabilisation. Salas M 2003 Journal of molecular biology
phi 29 DNA polymerase residue Leu384, highly conserved in motif B of eukaryotic type DNA replicases, is involved in nucleotide insertion fidelity. Salas M 2003 The Journal of biological chemistry
phi29 DNA polymerase residue Phe128 of the highly conserved (S/T)Lx(2)h motif is required for a stable and functional interaction with the terminal protein. Salas M 2003 Journal of molecular biology
A highly conserved lysine residue in phi29 DNA polymerase is important for correct binding of the templating nucleotide during initiation of phi29 DNA replication. Salas M 2002 Journal of molecular biology
Importance of the N-terminal region of the phage GA-1 single-stranded DNA-binding protein for its self-interaction ability and functionality. Salas M 2002 The Journal of biological chemistry
Phi29 DNA polymerase residues Tyr59, His61 and Phe69 of the highly conserved ExoII motif are essential for interaction with the terminal protein. Salas M 2002 Nucleic acids research
A positively charged residue of phi29 DNA polymerase, highly conserved in DNA polymerases from families A and B, is involved in binding the incoming nucleotide. Salas M 2002 Nucleic acids research
Characterization of the bacteriophage phi29-encoded protein p16.7: a membrane protein involved in phage DNA replication. Salas M 2001 Molecular microbiology
Phi29 family of phages. Salas M 2001 Microbiol Mol Biol Rev
The (I/Y)XGG motif of adenovirus DNA polymerase affects template DNA binding and the transition from initiation to elongation. Salas M 2001 The Journal of biological chemistry
The putative coiled coil domain of the phi 29 terminal protein is a major determinant involved in recognition of the origin of replication. Salas M 2000 The Journal of biological chemistry
Phage phi 29 DNA polymerase residues involved in the proper stabilisation of the primer-terminus at the 3'-5' exonuclease active site. Salas M 2000 Journal of molecular biology
An aspartic acid residue in TPR-1, a specific region of protein-priming DNA polymerases, is required for the functional interaction with primer terminal protein. Salas M 2000 Journal of molecular biology
Differential functional behavior of viral phi29, Nf and GA-1 SSB proteins. Salas M 2000 Nucleic acids research
Specific recognition of parental terminal protein by DNA polymerase for initiation of protein-primed DNA replication. Salas M 2000 The Journal of biological chemistry
Sequence requirements for protein-primed initiation and elongation of phage O29 DNA replication. Salas M 2000 The Journal of biological chemistry
Compartmentalization of phage phi29 DNA replication: interaction between the primer terminal protein and the membrane-associated protein p1. Salas M 2000 The EMBO journal
Analysis of O29 DNA polymerase by partial proteolysis: binding of terminal protein in the double-stranded DNA channel. Salas M 2000 Journal of molecular biology
A single tyrosine prevents insertion of ribonucleotides in the eukaryotic-type phi29 DNA polymerase. Salas M 1999 Journal of molecular biology
Oligomeric structures of the phage phi29 histone-like protein p6. Salas M 1999 Journal of molecular biology
Role of the "YxGG/A" motif of Phi29 DNA polymerase in protein-primed replication. Salas M 1999 Journal of molecular biology
Processive proofreading and the spatial relationship between polymerase and exonuclease active sites of bacteriophage phi29 DNA polymerase. Salas M 1999 Journal of molecular biology
Resolution of head-on collisions between the transcription machinery and bacteriophage phi29 DNA polymerase is dependent on RNA polymerase translocation. Salas M 1999 The EMBO journal
Phage phi29 terminal protein residues Asn80 and Tyr82 are recognition elements of the replication origins. Salas M 1999 The Journal of biological chemistry
Bacteriophage phi29 early protein p17 is conditionally required for the first rounds of viral DNA replication. Salas M 1998 Gene
phi29 DNA polymerase residue Ser122, a single-stranded DNA ligand for 3'-5' exonucleolysis, is required to interact with the terminal protein. Salas M 1998 The Journal of biological chemistry
Mutational analysis of phi29 DNA polymerase residues acting as ssDNA ligands for 3'-5' exonucleolysis. Salas M 1998 Journal of molecular biology
The RGD sequence in phage phi29 terminal protein is required for interaction with phi29 DNA polymerase. Salas M 1998 Virology
DNA polymerase template switching at specific sites on the phi29 genome causes the in vivo accumulation of subgenomic phi29 DNA molecules. Salas M 1998 Molecular microbiology
Role of the first aspartate residue of the "YxDTDS" motif of phi29 DNA polymerase as a metal ligand during both TP-primed and DNA-primed DNA synthesis. Salas M 1998 Journal of molecular biology
Phi 29 DNA polymerase requires the N-terminal domain to bind terminal protein and DNA primer substrates. Salas M 1998 Journal of molecular biology
Processive proofreading by the adenovirus DNA polymerase. Association with the priming protein reduces exonucleolytic degradation. Salas M 1997 Nucleic acids research
An invariant lysine residue is involved in catalysis at the 3'-5' exonuclease active site of eukaryotic-type DNA polymerases. Salas M 1997 Journal of molecular biology
In vitro evolution of terminal protein-containing genomes. Salas M 1997 Proceedings of the National Academy of Sciences of the United States of America
o29 DNA polymerase residue Lys383, invariant at motif B of DNA-dependent polymerases, is involved in dNTP binding. Salas M 1997 Journal of molecular biology
Protein-primed DNA replication: a transition between two modes of priming by a unique DNA polymerase. Salas M 1997 The EMBO journal
Bacteriophage phi29 DNA replication arrest caused by codirectional collisions with the transcription machinery. Salas M 1997 The EMBO journal
Structural features of phi29 single-stranded DNA-binding protein. II. Global conformation of phi29 single-stranded DNA-binding protein and the effects of complex formation on the protein and the single-stranded DNA. Salas M 1997 The Journal of biological chemistry
Initiation of bacteriophage phi29 DNA replication in vivo: assembly of a membrane-associated multiprotein complex. Salas M 1997 Journal of molecular biology
Phage phi29 protein p6 is in a monomer-dimer equilibrium that shifts to higher association states at the millimolar concentrations found in vivo. Salas M 1997 Biochemistry
Primer-terminus stabilization at the 3'-5' exonuclease active site of phi29 DNA polymerase. Involvement of two amino acid residues highly conserved in proofreading DNA polymerases. Salas M 1996 The EMBO journal
A DNA binding motif coordinating synthesis and degradation in proofreading DNA polymerases. Salas M 1996 The EMBO journal
Functional characterization of the genes coding for the terminal protein and DNA polymerase from bacteriophage GA-1. Evidence for a sliding-back mechanism during protein-primed GA-1 DNA replication. Salas M 1996 Journal of molecular biology
Relating structure to function in phi29 DNA polymerase. Salas M 1996 The Journal of biological chemistry
Activation of replication origins in phi29-related phages requires the recognition of initiation proteins to specific nucleoprotein complexes. Salas M 1996 The Journal of biological chemistry
Protein-nucleic acid interactions in bacteriophage phi 29 DNA replication. Salas M 1995 FEMS microbiology reviews
Primer terminus stabilization at the phi 29 DNA polymerase active site. Mutational analysis of conserved motif KXY. Salas M 1995 The Journal of biological chemistry
Purification of bacteriophage phi 29 DNA polymerase. Salas M 1995 Methods in enzymology
Mutational analysis of bacteriophage phi 29 DNA polymerase. Salas M 1995 Methods in enzymology
Helix-destabilizing activity of phi 29 single-stranded DNA binding protein: effect on the elongation rate during strand displacement DNA replication. Salas M 1995 Journal of molecular biology
A novel kinetic analysis to calculate nucleotide affinity of proofreading DNA polymerases. Application to phi 29 DNA polymerase fidelity mutants. Salas M 1995 The Journal of biological chemistry
3'-->5' exonuclease active site of phi 29 DNA polymerase. Evidence favoring a metal ion-assisted reaction mechanism. Salas M 1994 The Journal of biological chemistry
Primer-terminus stabilization at the psi 29 DNA polymerase active site. Mutational analysis of conserved motif TX2GR. Salas M 1994 The Journal of biological chemistry
Terminal protein-primed DNA amplification. Salas M 1994 Proceedings of the National Academy of Sciences of the United States of America
Phi 29 DNA polymerase active site. The conserved amino acid motif "Kx3NSxYG" is involved in template-primer binding and dNTP selection. Salas M 1993 The Journal of biological chemistry
Phi 29 DNA polymerase active site. Residue ASP249 of conserved amino acid motif "Dx2SLYP" is critical for synthetic activities. Salas M 1993 The Journal of biological chemistry
In vitro replication of bacteriophage PRD1 DNA. Characterization of the protein-primed initiation site. Salas M 1993 Nucleic acids research
Fidelity of phi 29 DNA polymerase. Comparison between protein-primed initiation and DNA polymerization. Salas M 1993 The Journal of biological chemistry
The bacteriophage phi 29 DNA polymerase, a proofreading enzyme. Salas M 1992 The Journal of biological chemistry
Site-directed mutagenesis at the Exo III motif of phi 29 DNA polymerase; overlapping structural domains for the 3'-5' exonuclease and strand-displacement activities. Salas M 1992 The EMBO journal
Initiation of phi 29 DNA replication occurs at the second 3' nucleotide of the linear template: a sliding-back mechanism for protein-primed DNA replication. Salas M 1992 Proceedings of the National Academy of Sciences of the United States of America
Metal activation of synthetic and degradative activities of phi 29 DNA polymerase, a model enzyme for protein-primed DNA replication. Salas M 1992 Biochemistry
Phi 29 DNA polymerase active site. Mutants in conserved residues Tyr254 and Tyr390 are affected in dNTP binding. Salas M 1992 The Journal of biological chemistry
Structural and functional studies on phi 29 DNA polymerase. Salas M 1992 Chromosoma
In vitro replication of bacteriophage PRD1 DNA. Metal activation of protein-primed initiation and DNA elongation. Salas M 1992 Nucleic acids research
Evidence favouring the hypothesis of a conserved 3'-5' exonuclease active site in DNA-dependent DNA polymerases. Salas M 1992 Gene
DNA-independent deoxynucleotidylation of the phi 29 terminal protein by the phi 29 DNA polymerase. Salas M 1992 The Journal of biological chemistry
Mechanism of stimulation of DNA replication by bacteriophage phi 29 single-stranded DNA-binding protein p5. Salas M 1991 The Journal of biological chemistry
Characterization and mapping of the pyrophosphorolytic activity of the phage phi 29 DNA polymerase. Involvement of amino acid motifs highly conserved in alpha-like DNA polymerases. Salas M 1991 The Journal of biological chemistry
MIP1 DNA polymerase of S. cerevisiae: structural similarity with the E. coli DNA polymerase I-type enzymes. Salas M 1991 Nucleic acids research
A general structure for DNA-dependent DNA polymerases. Salas M 1991 Gene
Site-directed mutagenesis of the YCDTDS amino acid motif of the phi 29 DNA polymerase. Salas M 1990 Gene
Structural and functional analysis of temperature-sensitive mutants of the phage phi 29 DNA polymerase. Salas M 1990 Nucleic acids research
The highly conserved amino acid sequence motif Tyr-Gly-Asp-Thr-Asp-Ser in alpha-like DNA polymerases is required by phage phi 29 DNA polymerase for protein-primed initiation and polymerization. Salas M 1990 Proceedings of the National Academy of Sciences of the United States of America
Functional domain for priming activity in the phage phi 29 terminal protein. Salas M 1990 Gene
Highly efficient DNA synthesis by the phage phi 29 DNA polymerase. Symmetrical mode of DNA replication. Salas M 1989 The Journal of biological chemistry
Effects of internal deletions on the priming activity of the phage phi 29 terminal protein. Salas M 1989 Gene
Functional domains in the bacteriophage phi 29 terminal protein for interaction with the phi 29 DNA polymerase and with DNA. Salas M 1989 Nucleic acids research
A conserved 3'----5' exonuclease active site in prokaryotic and eukaryotic DNA polymerases. Salas M 1989 Cell
Protein-primed replication of bacteriophage phi 29 DNA. Salas M 1988 Biochimica et biophysica acta
Site-directed mutagenesis in the DNA linking site of bacteriophage phi 29 terminal protein: isolation and characterization of a Ser232----Thr mutant. Salas M 1988 Nucleic acids research
Initiation of phage phi 29 DNA replication by mutants with deletions at the amino end of the terminal protein. Salas M 1988 Gene
Effect of NH4+ ions on phi 29 DNA-protein p3 replication: formation of a complex between the terminal protein and the DNA polymerase. Salas M 1987 J Virol
Structural and functional relationships between prokaryotic and eukaryotic DNA polymerases. Salas M 1987 The EMBO journal
Replication of phage phi 29 DNA in vitro: role of the viral protein p6 in initiation and elongation. Salas M 1986 Nucleic acids research
Effect of aphidicolin and nucleotide analogs on the phage phi 29 DNA polymerase. Salas M 1986 Virology
Formation of a covalent complex between the terminal protein of pneumococcal bacteriophage Cp-1 and 5'-dAMP. Salas M 1986 J Virol
Signals in the phi 29 DNA-terminal protein template for the initiation of phage phi 29 DNA replication. Salas M 1986 Virology
Initiation of phage phi 29 DNA replication by mutants with deletions at the carboxyl end of the terminal protein. Salas M 1986 Gene
Overproduction and purification of protein P6 of Bacillus subtilis phage phi 29: role in the initiation of DNA replication. Salas M 1985 Nucleic acids research
Replication of phage phi 29 DNA with purified terminal protein and DNA polymerase: synthesis of full-length phi 29 DNA. Salas M 1985 Proceedings of the National Academy of Sciences of the United States of America
Location of the serine residue involved in the linkage between the terminal protein and the DNA of phage phi 29. Salas M 1985 Nucleic acids research
Characterization of a 3'----5' exonuclease activity in the phage phi 29-encoded DNA polymerase. Salas M 1985 Nucleic acids research
Purification in a functional form of the terminal protein of Bacillus subtilis phage phi 29. Salas M 1984 Proceedings of the National Academy of Sciences of the United States of America
A new mechanism for the initiation of replication of phi 29 and adenovirus DNA: priming by the terminal protein. Salas M 1984 Curr Top Microbiol Immunol
Characterization and purification of a phage phi 29-encoded DNA polymerase required for the initiation of replication. Salas M 1984 Proceedings of the National Academy of Sciences of the United States of America
Initiation of phage phi 29 DNA replication by the terminal protein modified at the carboxyl end. Salas M 1983 Nucleic acids research
Factors involved in the initiation of phage phi 29 DNA replication in vitro: requirement of the gene 2 product for the formation of the protein p3-dAMP complex. Salas M 1983 Nucleic acids research
Initiation of phage phi 29 DNA replication in vitro: formation of a covalent complex between the terminal protein, p3, and 5'-dAMP. Salas M 1982 Proceedings of the National Academy of Sciences of the United States of America
Structural organization of Bacillus subtilis phage phi29. A model. Salas M 1981 Virology
The orderly, in vitro emergence of DNA from bacteriophage phi29 particles. Salas M 1981 Virology
Comparison of the A-T rich regions and the Bacillus subtilis RNA polymerase binding sites in phage phi 29 DNA. Salas M 1979 Nucleic acids research
RNA polymerase binding sites and transcription map of the DNA of Bacillus subtilis phage phi29. Salas M 1979 Journal of molecular biology
Characterization of a protein covalently linked to the 5' termini of the DNA of Bacillus subtilis phage phi29. Salas M 1978 Journal of molecular biology
Assembly of Bacillus subtilis phage phi29. 1. Mutants in the cistrons coding for the structural proteins. Salas M 1977 Eur J Biochem
Transcription in vitro of phi29 DNA and EcoRI fragments by Bacillus subtilis RNA polymerase. Salas M 1976 Eur J Biochem
Bacillus subtilis phage phi29. Characterization of gene products and functions. Salas M 1976 Eur J Biochem
Structure and assembly of phage phi29. Salas M 1976 Philosophical transactions of the Royal Society of London. Series B, Biological sciences
Physical map of bacteriophage phi29 DNA. Salas M 1976 Virology
Discrepancy in the mobility of a protein of phage phi29 in 2 different SDS polyacrylamide-gel systems. Salas M 1975 Anal Biochem
Synthesis in vitro of phi29-specific early proteins directed by phage DNA. Salas M 1975 Eur J Biochem
Biophysical properties of bacteriophage phi29. Salas M 1974 Virology
Initiation of the transcription of phi29 DNA by Bacillus subtilis RNA polymerase. Salas M 1974 Biochimica et biophysica acta
Proteins induced in Bacillus subtilis infected with bacteriophage phi29. Salas M 1973 Virology
Head-neck connecting protein in phage phi29. Salas M 1972 Virology
Temperature-sensitive mutants affected in DNA synthesis in phage phi29 of Bacillus subtilis. Salas M 1972 Eur J Biochem
RNA polymerase from Bacillus amyloliquefaciens. Salas M 1972 Biochimica et biophysica acta
Purification and properties of DNA-dependent RNA polymerase from Bacillus subtilis vegetative cells. Salas M 1971 Eur J Biochem
Subunit composition of B. subtilis RNA polymerase. Salas M 1970 Nature
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