T7 |
Virus/Phage |
A
|
Replication, Repair and Translesion Polymerase Bypass of N6-Oxopropenyl-2'-deoxyadenosine. |
Idles |
Reaction: Nucleotide incorporation; Substrate: dTTP; DNA lesion: OPdA |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
Bypasses |
|
Eco Pol I |
Eubacterium |
A
|
Processive DNA synthesis by DNA polymerase II mediated by DNA polymerase III accessory proteins. |
Bypasses |
Reaction: Nucleotide incorporation; DNA lesion: Apurinic/Apyrimidinic (AP) site |
Klenow fragment |
Eubacterium |
A
|
Kinetics of DNA polymerase I (Klenow fragment exo-) activity on damaged DNA templates: effect of proximal and distal template damage on DNA synthesis. |
Bypasses |
Reaction: Nucleotide incorporation; DNA lesion: 8-oxo-dG |
Dpo4 |
Archaeon |
Y
|
Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dATP; DNA lesion: Apurinic/Apyrimidinic (AP) site |
Dpo4 |
Archaeon |
Y
|
Increased flexibility enhances misincorporation: temperature effects on nucleotide incorporation opposite a bulky carcinogen-DNA adduct by a Y-family DNA polymerase. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dNTPs; DNA lesion: 8-oxo-dG |
Dpo4 |
Archaeon |
Y
|
Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dATP; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Human Pol eta |
Eukaryote |
Y
|
Emerging links between hypermutation of antibody genes and DNA polymerases. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: UV-induced Pyrimidine Dimer |
Human Pol eta |
Eukaryote |
Y
|
Amino acid substitutions at conserved tyrosine 52 alter fidelity and bypass efficiency of human DNA polymerase eta. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dNTPs; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Human Pol eta |
Eukaryote |
Y
|
Replication, Repair and Translesion Polymerase Bypass of N6-Oxopropenyl-2'-deoxyadenosine. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dTTP; DNA lesion: OPdA |
Human Pol eta |
Eukaryote |
Y
|
Ubiquitylation of proliferating cell nuclear antigen and recruitment of human DNA polymerase eta. |
Bypasses |
Reaction: Nucleotide incorporation; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Human Pol eta |
Eukaryote |
Y
|
Functions of human DNA polymerases eta, kappa and iota suggested by their properties, including fidelity with undamaged DNA templates. |
Bypasses |
Reaction: Nucleotide incorporation; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Human Pol eta |
Eukaryote |
Y
|
Emerging links between hypermutation of antibody genes and DNA polymerases. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: 8-hydroxyguanine |
Human Pol kappa |
Eukaryote |
Y
|
Purification and characterization of pol kappa, a DNA polymerase encoded by the human DINB1 gene. |
Bypasses |
Reaction: Nucleotide incorporation |
Human Pol kappa |
Eukaryote |
Y
|
Replication, Repair and Translesion Polymerase Bypass of N6-Oxopropenyl-2'-deoxyadenosine. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dTTP; DNA lesion: OPdA |
Human Pol beta |
Eukaryote |
X
|
DNA polymerase family X: function, structure, and cellular roles. |
Bypasses |
Reaction: Nucleotide incorporation |
Human Pol beta |
Eukaryote |
X
|
DNA polymerase family X: function, structure, and cellular roles. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dCTP; DNA lesion: 8-oxo-dG |
Human Pol beta |
Eukaryote |
X
|
Replication, Repair and Translesion Polymerase Bypass of N6-Oxopropenyl-2'-deoxyadenosine. |
Stalls |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: OPdA |
Human Pol beta |
Eukaryote |
X
|
DNA polymerase family X: function, structure, and cellular roles. |
Bypasses |
Reaction: Nucleotide incorporation |
Pfu |
Archaeon |
B
|
Interaction of the family-B DNA polymerase from the archaeon Pyrococcus furiosus with deaminated bases. |
Stalls |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: dUTP (uracil) |
Pfu |
Archaeon |
B
|
Interaction of the family-B DNA polymerase from the archaeon Pyrococcus furiosus with deaminated bases. |
Stalls |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: dITP (inosine) |
Human Pol lamba |
Eukaryote |
X
|
DNA polymerase family X: function, structure, and cellular roles. |
Bypasses |
Reaction: Nucleotide incorporation; DNA lesion: 8-oxo-dG |
Human Pol mu |
Eukaryote |
X
|
DNA polymerase family X: function, structure, and cellular roles. |
Bypasses |
Reaction: Nucleotide incorporation; DNA lesion: Apurinic/Apyrimidinic (AP) site |
Human Pol mu |
Eukaryote |
X
|
DNA polymerase family X: function, structure, and cellular roles. |
Bypasses |
Reaction: Nucleotide incorporation; DNA lesion: 8-oxo-dG |
Human Pol iota |
Eukaryote |
Y
|
Replication, Repair and Translesion Polymerase Bypass of N6-Oxopropenyl-2'-deoxyadenosine. |
Idles |
Reaction: Nucleotide incorporation; Substrate: dTTP; DNA lesion: OPdA |
Human Pol delta |
Eukaryote |
B
|
Human replicative DNA polymerase δ can bypass T-T (6-4) ultraviolet photoproducts on template strands. |
Bypasses |
Reaction: Nucleotide incorporation; DNA lesion: TC 6,4 Photodimer |
Human Pol theta |
Eukaryote |
A
|
The human DINB1 gene encodes the DNA polymerase Poltheta. |
Stalls |
Reaction: Nucleotide incorporation; DNA lesion: TC 6,4 Photodimer |
Human Pol theta |
Eukaryote |
A
|
The human DINB1 gene encodes the DNA polymerase Poltheta. |
Stalls |
Reaction: Nucleotide incorporation; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Human Pol theta |
Eukaryote |
A
|
The human DINB1 gene encodes the DNA polymerase Poltheta. |
Stalls |
Reaction: Nucleotide incorporation; DNA lesion: Apurinic/Apyrimidinic (AP) site |
Pol eta Y52E |
Eukaryote |
Y
|
Amino acid substitutions at conserved tyrosine 52 alter fidelity and bypass efficiency of human DNA polymerase eta. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dNTPs; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Pol eta Y52D |
Eukaryote |
Y
|
Amino acid substitutions at conserved tyrosine 52 alter fidelity and bypass efficiency of human DNA polymerase eta. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dNTPs; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Pol eta Y52H |
Eukaryote |
Y
|
Amino acid substitutions at conserved tyrosine 52 alter fidelity and bypass efficiency of human DNA polymerase eta. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dNTPs; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Pol eta Y52F |
Eukaryote |
Y
|
Amino acid substitutions at conserved tyrosine 52 alter fidelity and bypass efficiency of human DNA polymerase eta. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dNTPs; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Pol eta Y52A |
Eukaryote |
Y
|
Amino acid substitutions at conserved tyrosine 52 alter fidelity and bypass efficiency of human DNA polymerase eta. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dNTPs; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
SsoDpo1 |
Archaeon |
B
|
Replication, Repair and Translesion Polymerase Bypass of N6-Oxopropenyl-2'-deoxyadenosine. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dTTP; DNA lesion: OPdA |
Human Pol nu |
Eukaryote |
A
|
Human DNA polymerase N (POLN) is a low fidelity enzyme capable of error-free bypass of 5S-thymine glycol. |
Stalls |
Reaction: Nucleotide incorporation; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Human Pol nu |
Eukaryote |
A
|
Human DNA polymerase N (POLN) is a low fidelity enzyme capable of error-free bypass of 5S-thymine glycol. |
Stalls |
Reaction: Nucleotide incorporation; DNA lesion: Apurinic/Apyrimidinic (AP) site |
Klenow Fragment D424A |
Eubacterium |
A
|
Coordination between the polymerase and 5'-nuclease components of DNA polymerase I of Escherichia coli. |
Unspecified |
Reaction: Nucleotide incorporation |
Tcr pol eta |
? |
?
|
Cloning and characterization of DNA polymerase eta from Trypanosoma cruzi: roles for translesion bypass of oxidative damage. |
Stalls |
Reaction: Nucleotide incorporation; Substrate: dNTPs; DNA lesion: 8-oxo-dG |
Pfu V93Q |
Archaeon |
B
|
Interaction of the family-B DNA polymerase from the archaeon Pyrococcus furiosus with deaminated bases. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: dITP (inosine) |
Pfu V93Q |
Archaeon |
B
|
Interaction of the family-B DNA polymerase from the archaeon Pyrococcus furiosus with deaminated bases. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: dUTP (uracil) |
Ath pol eta |
Eukaryote |
Y
|
Arabidopsis thaliana Y-family DNA polymerase eta catalyses translesion synthesis and interacts functionally with PCNA2. |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: TT Cyclobutane Pyrimidine Dimer |
Pab pol D |
Archaeon |
B
|
Intrinsic properties of the two replicative DNA polymerases of Pyrococcus abyssi in replicating abasic sites: possible role in DNA damage tolerance? |
Stalls |
Reaction: Nucleotide incorporation; Substrate: n/a; DNA lesion: Apurinic/Apyrimidinic (AP) site |
Pab pol B |
Archaeon |
B
|
Intrinsic properties of the two replicative DNA polymerases of Pyrococcus abyssi in replicating abasic sites: possible role in DNA damage tolerance? |
Bypasses |
Reaction: Nucleotide incorporation; Substrate: dATP; DNA lesion: Apurinic/Apyrimidinic (AP) site |