RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.004 /second |
Reaction: Misincorporation; Substrate: dATP |
RB69 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
17 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrat: 3'-tailed duplex phosphorothioate) |
RB69 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
3 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 6.5) |
RB69 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
5 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7) |
RB69 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
6.6 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7.5) |
RB69 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
7.7 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8) |
RB69 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
8.1 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8.5) |
RB69 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
24 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex all-oxygen substrate) |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
220 /second |
Reaction: Nucleotide incorporation; Substrate: dATP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.015 /second |
Reaction: Misincorporation; Substrate: dTTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
200 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.14 /second |
Reaction: Misincorporation; Substrate: dTTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.013 /second |
Reaction: Misincorporation; Substrate: dCTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
167 /second |
Reaction: Nucleotide incorporation; Substrate: dGTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
240 /second |
Reaction: Nucleotide incorporation; Substrate: dTTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.08 /second |
Reaction: Misincorporation; Substrate: dATP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.013 /second |
Reaction: Misincorporation; Substrate: dATP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.003 /second |
Reaction: Misincorporation; Substrate: dGTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.09 /second |
Reaction: Misincorporation; Substrate: dTTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.001 /second |
Reaction: Misincorporation; Substrate: dCTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.041 /second |
Reaction: Misincorporation; Substrate: dGTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.77 /second |
Reaction: Misincorporation; Substrate: dCTP |
RB69 |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.011 /second |
Reaction: Misincorporation; Substrate: dGTP |
Vent |
Archaeon |
B
|
DNA polymerases from hyperthermophiles. |
1000 /minute |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
0.3 /second |
Reaction: Nucleotide incorporation; Substrate: ddCTP; Technique: Rapid quench (single turnover); Experimental conditions: Mg++ (2mM), pH (pH 8.8), Temp (60°C) |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
45 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Rapid quench (burst conditions); Experimental conditions: Mg++ (2mM), pH (pH 8.8), Temp (60°C) |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
13 /second |
Reaction: Nucleotide incorporation; Substrate: CTP analog; Technique: Rapid quench (single turnover); Experimental conditions: Mg++ (2mM), pH (pH 8.8), Temp (60°C) |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
0.7 /second |
Reaction: Nucleotide incorporation; Substrate: rCTP; Technique: Rapid quench (single turnover); Experimental conditions: Mg++ (2mM), pH (pH 8.8), Temp (60°C) |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
56 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Rapid quench (single turnover); Experimental conditions: Mg++ (2mM), pH (pH 8.8), Temp (60°C) |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
0.63 /second |
Reaction: Pyrophosphorolysis; Substrate: DNA template; Technique: Rapid quench (single turnover); Experimental conditions: Mg++ (2mM), pH (pH 8.8), Temp (60°C) |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
13 /second |
Technique: Rapid quench (single turnover); Experimental conditions: Mg++ (2mM), pH (pH 8.8), Temp (60°C) |
Vent A488L |
Archaeon |
B
|
Comparative kinetics of nucleotide analog incorporation by vent DNA polymerase. |
0.47 /second |
Reaction: Nucleotide incorporation; Substrate: ddCTP; Technique: Rapid quench (burst conditions); Experimental conditions: Mg++ (2mM), pH (pH 8.8), Temp (60°C) |
T4 D219A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
402 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template T) |
T4 D219A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
3.36 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template F) |
T4 D219A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
6E-05 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 D219A |
Virus/Phage |
B
|
Construction and characterization of a bacteriophage T4 DNA polymerase deficient in 3'-->5' exonuclease activity. |
3 /second |
Reaction: Nucleotide incorporation; Substrate: dATP |
T4 D219A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
0.18 /second |
Reaction: Misincorporation; Substrate: dTTP; Technique: Multiple Turnover (across template T) |
T4 D219A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
0.56 /second |
Reaction: Misincorporation; Substrate: dATP; Technique: Multiple Turnover (across template C) |
T4 D219A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
0.096 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
91 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 |
Virus/Phage |
B
|
DNA polymerase proofreading: active site switching catalyzed by the bacteriophage T4 DNA polymerase. |
145 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (with heparin); Experimental conditions: Temp (37°C), Mg++ (8mM) |
T4 |
Virus/Phage |
B
|
DNA polymerase proofreading: active site switching catalyzed by the bacteriophage T4 DNA polymerase. |
106 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Multiple Turnover (without heparin); Experimental conditions: Mg++ (8mM), Temp (37°C) |
T4 |
Virus/Phage |
B
|
Isolation, characterization, and kinetic properties of truncated forms of T4 DNA polymerase that exhibit 3'-5' exonuclease activity. |
170 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 |
Virus/Phage |
B
|
Isolation, characterization, and kinetic properties of truncated forms of T4 DNA polymerase that exhibit 3'-5' exonuclease activity. |
420 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 |
Virus/Phage |
B
|
Mutational and pH studies of the 3' --> 5' exonuclease activity of bacteriophage T4 DNA polymerase. |
200 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Degradation of labeled single-stranded DNA |
T4 |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
65.1 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
0.16 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
130 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex all-oxygen substrate) |
T4 W213S |
Virus/Phage |
B
|
DNA polymerase proofreading: active site switching catalyzed by the bacteriophage T4 DNA polymerase. |
1.5 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: Mg++ (8mM), Temp (37°C) |
T4 D112AE114A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
3.24 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template F) |
T4 D112AE114A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
361 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template T) |
T4 D324A |
Virus/Phage |
B
|
Mutational and pH studies of the 3' --> 5' exonuclease activity of bacteriophage T4 DNA polymerase. |
0.01 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Degradation of labeled single-stranded DNA (9.5) |
T4 D324A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
0.0062 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 D324A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
180 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template T) |
T4 D324A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
7E-05 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 D324A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
2.13 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template F) |
RB69 D114AE116A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
270 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template T) |
RB69 D114AE116A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
0.43 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template F) |
RB69 D222A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
320 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template T) |
RB69 D222A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
0.97 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template F) |
RB69 D222A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
0.43 /second |
Reaction: Misincorporation; Substrate: dATP; Technique: Multiple Turnover (across template C) |
RB69 D222A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
0.04 /second |
Reaction: Misincorporation; Substrate: dTTP; Technique: Multiple Turnover (across template T) |
RB69 D327A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
0.53 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template F) |
RB69 D327A |
Virus/Phage |
B
|
Kinetics of error generation in homologous B-family DNA polymerases. |
224 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Single Turnover (across template T) |
Klenow fragment |
Eubacterium |
A
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.02 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ( Substrate: 3'-tailed duplex phosphorothioate substrate) |
Klenow fragment |
Eubacterium |
A
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
0.09 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (ssDNA: poly(dT)); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
Klenow fragment |
Eubacterium |
A
|
DNA polymerases from hyperthermophiles. |
310 /minute |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
Klenow fragment |
Eubacterium |
A
|
Isolation, characterization, and kinetic properties of truncated forms of T4 DNA polymerase that exhibit 3'-5' exonuclease activity. |
5.8 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
Klenow fragment |
Eubacterium |
A
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0017 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 6.5) |
Klenow fragment |
Eubacterium |
A
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0054 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7) |
Klenow fragment |
Eubacterium |
A
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.016 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7.5) |
Klenow fragment |
Eubacterium |
A
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.052 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8) |
Klenow fragment |
Eubacterium |
A
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.16 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8.5) |
Klenow fragment |
Eubacterium |
A
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.33 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex all-oxygen substrate) |
Klenow fragment |
Eubacterium |
A
|
Isolation, characterization, and kinetic properties of truncated forms of T4 DNA polymerase that exhibit 3'-5' exonuclease activity. |
7.8 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
Klenow fragment |
Eubacterium |
A
|
Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal. |
5.2 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
Klenow fragment |
Eubacterium |
A
|
A thumb subdomain mutant of the large fragment of Escherichia coli DNA polymerase I with reduced DNA binding affinity, processivity, and frameshift fidelity. |
0.3 /second |
Reaction: Nucleotide incorporation; Substrate: dTTP |
Klenow fragment |
Eubacterium |
A
|
Fingers-closing and other rapid conformational changes in DNA polymerase I (Klenow fragment) and their role in nucleotide selectivity. |
140 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Stopped flow (FRET assay of fingers-closing); Experimental conditions: pH (pH 7.5), Mg++ (5mM), Temp (22°C) |
Klenow fragment |
Eubacterium |
A
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
0.12 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (ssDNA: poly(dA)); Experimental conditions: pH (pH 7.5), Mg++ (8mM), Temp (37°C) |
T4 Y320FD324A |
Virus/Phage |
B
|
Mutational and pH studies of the 3' --> 5' exonuclease activity of bacteriophage T4 DNA polymerase. |
0.1 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Degradation of labeled single-stranded DNA |
T4 D112A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
0.0037 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 D112A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
0.0078 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
Dpo4 |
Archaeon |
Y
|
Molecular basis of selectivity of nucleoside triphosphate incorporation opposite O6-benzylguanine by sulfolobus solfataricus DNA polymerase Dpo4: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing. |
0.055 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State (O6-BzG) |
Dpo4 |
Archaeon |
Y
|
Molecular basis of selectivity of nucleoside triphosphate incorporation opposite O6-benzylguanine by sulfolobus solfataricus DNA polymerase Dpo4: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing. |
0.58 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State (O6-BzG) |
Dpo4 |
Archaeon |
Y
|
Molecular basis of selectivity of nucleoside triphosphate incorporation opposite O6-benzylguanine by sulfolobus solfataricus DNA polymerase Dpo4: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing. |
0.0066 /second |
Reaction: Nucleotide incorporation; Substrate: dTTP; Technique: Steady State (O6-BzG) |
Dpo4 |
Archaeon |
Y
|
Molecular basis of selectivity of nucleoside triphosphate incorporation opposite O6-benzylguanine by sulfolobus solfataricus DNA polymerase Dpo4: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing. |
0.0025 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Steady State (O6-BzG) |
Dpo4 |
Archaeon |
Y
|
Molecular basis of selectivity of nucleoside triphosphate incorporation opposite O6-benzylguanine by sulfolobus solfataricus DNA polymerase Dpo4: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing. |
0.00083 /second |
Reaction: Nucleotide incorporation; Substrate: dGTP; Technique: Steady State (O6-BzG) |
Dpo4 |
Archaeon |
Y
|
Kinetic analysis of correct nucleotide insertion by a Y-family DNA polymerase reveals conformational changes both prior to and following phosphodiester bond formation as detected by tryptophan fluorescence. |
0.8 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State (Template G) |
Human Pol eta |
Eukaryote |
Y
|
Yeast DNA polymerase eta utilizes an induced-fit mechanism of nucleotide incorporation. |
0.01 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
Dpo4 T239W |
Archaeon |
Y
|
Kinetic analysis of correct nucleotide insertion by a Y-family DNA polymerase reveals conformational changes both prior to and following phosphodiester bond formation as detected by tryptophan fluorescence. |
0.34 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State |
Dpo4 N188W |
Archaeon |
Y
|
Kinetic analysis of correct nucleotide insertion by a Y-family DNA polymerase reveals conformational changes both prior to and following phosphodiester bond formation as detected by tryptophan fluorescence. |
0.47 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State |
Human Pol gamma |
Eukaryote |
A
|
Expression, purification, and initial kinetic characterization of the large subunit of the human mitochondrial DNA polymerase. |
0.03 /second |
|
Human Pol gamma |
Eukaryote |
A
|
Expression, purification, and initial kinetic characterization of the large subunit of the human mitochondrial DNA polymerase. |
0.18 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
Taq pol I |
Eubacterium |
A
|
Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 A resolution. |
46.6 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Filter binding (16.5nM primed M13); Experimental conditions: Temp (72°C) |
Taq pol I |
Eubacterium |
A
|
Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal. |
46.6 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
Taq pol I |
Eubacterium |
A
|
DNA polymerases from hyperthermophiles. |
2800 /minute |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
HIV RT |
Virus/Phage |
RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template. |
0.77 /minute |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Steady State |
HIV RT |
Virus/Phage |
RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template. |
0.5 /minute |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State |
HIV RT |
Virus/Phage |
RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template. |
0.43 /minute |
Reaction: Nucleotide incorporation; Substrate: dTTP; Technique: Steady State |
HIV RT |
Virus/Phage |
RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template. |
0.12 /minute |
Reaction: Nucleotide incorporation; Substrate: dGTP; Technique: Steady State |
HIV RT |
Virus/Phage |
RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate. |
0.025 /second |
Reaction: Nucleotide incorporation; Substrate: dTTP; Technique: Rapid quench (RNA template) |
HIV RT |
Virus/Phage |
RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate. |
1.9 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Rapid quench (RNA template) |
HIV RT |
Virus/Phage |
RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate. |
0.071 /second |
Reaction: Nucleotide incorporation; Substrate: TTP analog; Technique: Rapid quench (RNA template) |
Pfu |
Archaeon |
B
|
DNA polymerases from hyperthermophiles. |
560 /minute |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
Human Pol lamba |
Eukaryote |
X
|
Loop 1 modulates the fidelity of DNA polymerase {lambda} |
0.012 /second |
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Steady State |
Human Pol lamba |
Eukaryote |
X
|
Loop 1 modulates the fidelity of DNA polymerase {lambda} |
0.00014 /second |
Reaction: Nucleotide incorporation; Substrate: dGTP; Technique: Steady State |
Bst LF |
Eubacterium |
A
|
Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal. |
191.2 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
Bst LF |
Eubacterium |
A
|
Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 A resolution. |
191.2 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Filter binding (16.5 nM primed M13); Experimental conditions: Temp (65°C) |
Bst LF |
Eubacterium |
A
|
DNA polymerases from hyperthermophiles. |
1.15E+04 /minute |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
KF Y766S |
Eubacterium |
A
|
Identification of residues critical for the polymerase activity of the Klenow fragment of DNA polymerase I from Escherichia coli. |
0.8 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Rapid quench |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.75 /second |
Reaction: Misincorporation; Substrate: dATP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.03 /second |
Reaction: Misincorporation; Substrate: dATP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.01 /second |
Reaction: Misincorporation; Substrate: dGTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.03 /second |
Reaction: Misincorporation; Substrate: dATP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
115 /second |
Reaction: Nucleotide incorporation; Substrate: dTTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
101 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
89 /second |
Reaction: Nucleotide incorporation; Substrate: dGTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
108 /second |
Reaction: Nucleotide incorporation; Substrate: dATP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.13 /second |
Reaction: Misincorporation; Substrate: dTTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.05 /second |
Reaction: Misincorporation; Substrate: dTTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.14 /second |
Reaction: Misincorporation; Substrate: dCTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.8 /second |
Reaction: Misincorporation; Substrate: dTTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.03 /second |
Reaction: Misincorporation; Substrate: dCTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.18 /second |
Reaction: Misincorporation; Substrate: dGTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.26 /second |
Reaction: Misincorporation; Substrate: dCTP |
RB69 L561A |
Virus/Phage |
B
|
The L561A substitution in the nascent base-pair binding pocket of RB69 DNA polymerase reduces base discrimination. |
0.11 /second |
Reaction: Misincorporation; Substrate: dGTP |
Terminal Transferase |
Unknown |
?
|
Terminal deoxynucleotidyl transferase indiscriminately incorporates ribonucleotides and deoxyribonucleotides. |
76 /minute |
Reaction: Nucleotide incorporation; Substrate: rATP |
Terminal Transferase |
Unknown |
?
|
Terminal deoxynucleotidyl transferase indiscriminately incorporates ribonucleotides and deoxyribonucleotides. |
180 /minute |
Reaction: Nucleotide incorporation; Substrate: dATP |
Terminal Transferase |
Unknown |
?
|
Terminal deoxynucleotidyl transferase indiscriminately incorporates ribonucleotides and deoxyribonucleotides. |
147 /minute |
Reaction: Nucleotide incorporation; Substrate: dATP |
Terminal Transferase |
Unknown |
?
|
Terminal deoxynucleotidyl transferase indiscriminately incorporates ribonucleotides and deoxyribonucleotides. |
11.3 /minute |
Reaction: Nucleotide incorporation; Substrate: dATP |
Human Pol delta |
Eukaryote |
B
|
Kinetic analysis of nucleotide incorporation by mammalian DNA polymerase delta. |
0.36 /minute |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State (With PCNA) |
Human Pol delta |
Eukaryote |
B
|
Kinetic analysis of nucleotide incorporation by mammalian DNA polymerase delta. |
0.3 /minute |
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State (Without PCNA) |
KF D355A |
Eubacterium |
A
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
8.3E-08 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA substrate, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF E357A |
? |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
1.8E-06 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF L361A |
Eubacterium |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
0.044 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (ssDNA, poly(dA)); Experimental conditions: pH (pH 7.5), Mg++ (8mM), Temp (37°C) |
KF L361A |
Eubacterium |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
4E-05 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF L361M |
Eubacterium |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
8.3E-05 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF D424A |
Eubacterium |
A
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
1.3E-08 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Temp (37°C) |
KF D424E |
Eubacterium |
A
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
0.01 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (ssDNA, poly(dA)); Experimental conditions: pH (pH 7.5), Mg++ (8mM), Temp (37°C) |
KF D424E |
Eubacterium |
A
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
4E-05 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF D424N |
Eubacterium |
A
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
2.5E-08 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF F473A |
? |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
2.9E-07 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Temp (37°C) |
KF Y497F |
? |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
4.3E-05 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF Y497F |
? |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
0.0019 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (ssDNA, poly(dA)); Experimental conditions: pH (pH 7.5), Mg++ (8mM), Temp (37°C) |
KF D501A |
? |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
7.5E-08 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF D510E |
? |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
5.6E-06 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Mg++ (6mM), Temp (37°C) |
KF D510N |
? |
?
|
The 3'-5' exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. |
0.0005 /second |
Reaction: 3-5' Exonuclease; Technique: Steady State (dsDNA, assuming WT has rate 0.001/s); Experimental conditions: pH (pH 7.5), Temp (37°C) |
T4 D219AD324A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
0.0034 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 N698 |
Virus/Phage |
B
|
Isolation, characterization, and kinetic properties of truncated forms of T4 DNA polymerase that exhibit 3'-5' exonuclease activity. |
270 /second |
Reaction: 3-5' Exonuclease |
T4 N698 |
Virus/Phage |
B
|
Isolation, characterization, and kinetic properties of truncated forms of T4 DNA polymerase that exhibit 3'-5' exonuclease activity. |
170 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 N388 |
Virus/Phage |
B
|
Isolation, characterization, and kinetic properties of truncated forms of T4 DNA polymerase that exhibit 3'-5' exonuclease activity. |
170 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 D112N |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
0.001 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 E114A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
0.08 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
T4 E114A |
Virus/Phage |
B
|
Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase. |
2 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
RB69 E116A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.00011 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7) |
RB69 E116A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.00028 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7.5) |
RB69 E116A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.00075 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8) |
RB69 E116A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.00053 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8.5) |
RB69 E116A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
3.9E-05 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 6.5) |
RB69 K302A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.01 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7.5) |
RB69 K302A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0033 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7) |
RB69 K302A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.032 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8) |
RB69 K302A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.11 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8.5) |
RB69 K302A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0011 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 6.5) |
RB69 Y323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.019 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8) |
RB69 Y323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0058 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7.5) |
RB69 Y323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0018 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7) |
RB69 Y323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.00056 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 6.5) |
RB69 Y323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.14 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex all-oxygen substrate) |
RB69 Y323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0013 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex phosphorothioate substrate) |
RB69 Y323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.056 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8.5) |
RB69 K302AY323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.013 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex all-oxygen substrate) |
RB69 K302AY323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.002 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8.5) |
RB69 K302AY323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.00064 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 8) |
RB69 K302AY323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0002 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7.5) |
RB69 K302AY323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
6.5E-05 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 7) |
RB69 K302AY323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
2.1E-05 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ; Experimental conditions: pH (pH 6.5) |
RB69 K302AY323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.02 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex phosphorothioate substrate) |
RB69 K302AY323F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.00081 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex phosphorothioate substrate) |
T4 K229A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.05 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex phosphorothioate substrate) |
T4 K229A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.18 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex all-oxygen substrate) |
T4 Y320F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.00096 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ( Substrate: 3'-tailed duplex phosphorothioate substrate) |
T4 Y320F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.12 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex all-oxygen substrate) |
T4 Y320A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0085 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex phosphorothioate substrate) |
T4 Y320A |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.075 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover (Substrate: 3'-tailed duplex all-oxygen substrate) |
T4 K299AY320F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.013 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template; Technique: Single Turnover ( Substrate: 3'-tailed duplex phosphorothioate substrate) |
T4 K299AY320F |
Virus/Phage |
B
|
Pre-steady-state kinetics of RB69 DNA polymerase and its exo domain mutants: effect of pH and thiophosphoryl linkages on 3'-5' exonuclease activity. |
0.0005 /second |
Reaction: 3-5' Exonuclease; Substrate: DNA template |
GA-1 |
Virus/Phage |
B
|
Functional characterization of highly processive protein-primed DNA polymerases from phages Nf and GA-1, endowed with a potent strand displacement capacity. |
2260 /minute |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
FeLV RT |
Virus/Phage |
RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases. |
0.17 /second |
Reaction: Nucleotide incorporation; Substrate: dTTP |
FeLV RT |
Virus/Phage |
RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases. |
0.56 /second |
Reaction: Nucleotide incorporation; Substrate: dGTP |
FeLV RT |
Virus/Phage |
RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases. |
0.18 /second |
Reaction: Nucleotide incorporation; Substrate: dATP |
FeLV RT |
Virus/Phage |
RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases. |
0.15 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP |
FIV RT |
Virus/Phage |
RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases. |
0.51 /second |
Reaction: Nucleotide incorporation; Substrate: dGTP |
FIV RT |
Virus/Phage |
RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases. |
0.22 /second |
Reaction: Nucleotide incorporation; Substrate: dCTP |
FIV RT |
Virus/Phage |
RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases. |
0.28 /second |
Reaction: Nucleotide incorporation; Substrate: dTTP |
FIV RT |
Virus/Phage |
RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases. |
0.21 /second |
Reaction: Nucleotide incorporation; Substrate: dATP |
Sce pol gamma |
Eukaryote |
A
|
C-terminal extension of the yeast mitochondrial DNA polymerase determines the balance between synthesis and degradation. |
69 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Gel shift |
Pfu (exo-) |
? |
?
|
DNA polymerases from hyperthermophiles. |
550 /minute |
Reaction: Nucleotide incorporation; Substrate: dNTPs |
Sce pol gamma ∆216 |
Eukaryote |
A
|
C-terminal extension of the yeast mitochondrial DNA polymerase determines the balance between synthesis and degradation. |
65 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Gel shift |
Sce pol gamma ∆175 |
Eukaryote |
A
|
C-terminal extension of the yeast mitochondrial DNA polymerase determines the balance between synthesis and degradation. |
74 /second |
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Gel shift |