HIV RT
|
Expression, purification, and initial kinetic characterization of the large subunit of the human mitochondrial DNA polymerase.
|
Processivity
|
200bp
|
|
HIV RT
|
Expression, purification, and initial kinetic characterization of the large subunit of the human mitochondrial DNA polymerase.
|
Vmax
|
30 /second
|
Reaction: Nucleotide incorporation; Substrate: dNTPs
|
HIV RT
|
Expression, purification, and initial kinetic characterization of the large subunit of the human mitochondrial DNA polymerase.
|
Kd
|
4.7nM
|
Reaction: Polymerase-DNA interaction; Substrate: DNA template
|
HIV RT
|
Expression, purification, and initial kinetic characterization of the large subunit of the human mitochondrial DNA polymerase.
|
Kd
|
14uM
|
Reaction: Nucleotide incorporation; Substrate: dNTPs
|
HIV RT
|
The K65R mutation confers increased DNA polymerase processivity to HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
The K65R mutation confers increased DNA polymerase processivity to HIV-1 reverse transcriptase.
|
Cloned or native
|
Cloned in E. coli
|
|
HIV RT
|
The K65R mutation confers increased DNA polymerase processivity to HIV-1 reverse transcriptase.
|
Full length or truncated
|
Full length
|
|
HIV RT
|
The K65R mutation confers increased DNA polymerase processivity to HIV-1 reverse transcriptase.
|
Extension from RNA primer
|
Yes
|
|
HIV RT
|
Human immunodeficiency virus 1 reverse transcriptase. Template binding, processivity, strand displacement synthesis, and template switching.
|
3-5' Exonuclease (proofreading)
|
No
|
|
HIV RT
|
Human immunodeficiency virus 1 reverse transcriptase. Template binding, processivity, strand displacement synthesis, and template switching.
|
5-3' Exonuclease
|
No
|
|
HIV RT
|
Human immunodeficiency virus 1 reverse transcriptase. Template binding, processivity, strand displacement synthesis, and template switching.
|
RNase H
|
Yes
|
|
HIV RT
|
Human immunodeficiency virus 1 reverse transcriptase. Template binding, processivity, strand displacement synthesis, and template switching.
|
Processivity
|
15bp
|
|
HIV RT
|
Human immunodeficiency virus 1 reverse transcriptase. Template binding, processivity, strand displacement synthesis, and template switching.
|
KM
|
10uM
|
Reaction: Nucleotide incorporation; Substrate: dTTP
|
HIV RT
|
Human immunodeficiency virus 1 reverse transcriptase. Template binding, processivity, strand displacement synthesis, and template switching.
|
Kd
|
2.3uM
|
Reaction: Polymerase-DNA interaction; Substrate: RNA-DNA hybrid
|
HIV RT
|
Parameters that influence processive synthesis and site-specific termination by human immunodeficiency virus reverse transcriptase on RNA and DNA templates.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Parameters that influence processive synthesis and site-specific termination by human immunodeficiency virus reverse transcriptase on RNA and DNA templates.
|
Molecular Weight
|
1.17E+05 Dalton
|
|
HIV RT
|
Parameters that influence processive synthesis and site-specific termination by human immunodeficiency virus reverse transcriptase on RNA and DNA templates.
|
Full length or truncated
|
Full length
|
|
HIV RT
|
Parameters that influence processive synthesis and site-specific termination by human immunodeficiency virus reverse transcriptase on RNA and DNA templates.
|
RNase H
|
Yes
|
|
HIV RT
|
Parameters that influence processive synthesis and site-specific termination by human immunodeficiency virus reverse transcriptase on RNA and DNA templates.
|
Processivity
|
75bp
|
|
HIV RT
|
Parameters that influence processive synthesis and site-specific termination by human immunodeficiency virus reverse transcriptase on RNA and DNA templates.
|
Specific Activity
|
2.1E+04 units/mg
|
|
HIV RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.
|
KM
|
10nM
|
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State
|
HIV RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.
|
KM
|
40nM
|
Reaction: Nucleotide incorporation; Substrate: dTTP; Technique: Steady State
|
HIV RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.
|
KM
|
20nM
|
Reaction: Nucleotide incorporation; Substrate: dGTP; Technique: Steady State
|
HIV RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.
|
KM
|
100nM
|
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Steady State
|
HIV RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.
|
kcat
|
0.5 /minute
|
Reaction: Nucleotide incorporation; Substrate: dCTP; Technique: Steady State
|
HIV RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.
|
kcat
|
0.43 /minute
|
Reaction: Nucleotide incorporation; Substrate: dTTP; Technique: Steady State
|
HIV RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.
|
kcat
|
0.12 /minute
|
Reaction: Nucleotide incorporation; Substrate: dGTP; Technique: Steady State
|
HIV RT
|
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.
|
kcat
|
0.77 /minute
|
Reaction: Nucleotide incorporation; Substrate: dATP; Technique: Steady State
|
HIV RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate.
|
KM
|
0.082uM
|
Reaction: Nucleotide incorporation; Substrate: dTTP; Technique: Rapid quench (RNA template)
|
HIV RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate.
|
KM
|
10uM
|
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Rapid quench (RNA template)
|
HIV RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate.
|
KM
|
0.19uM
|
Reaction: Nucleotide incorporation; Substrate: TTP analog; Technique: Rapid quench
|
HIV RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate.
|
kcat
|
0.025 /second
|
Reaction: Nucleotide incorporation; Substrate: dTTP; Technique: Rapid quench (RNA template)
|
HIV RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate.
|
kcat
|
1.9 /second
|
Reaction: Nucleotide incorporation; Substrate: dNTPs; Technique: Rapid quench (RNA template)
|
HIV RT
|
Human immunodeficiency virus reverse transcriptase. Substrate and inhibitor kinetics with thymidine 5'-triphosphate and 3'-azido-3'-deoxythymidine 5'-triphosphate.
|
kcat
|
0.071 /second
|
Reaction: Nucleotide incorporation; Substrate: TTP analog; Technique: Rapid quench (RNA template)
|
HIV RT
|
Discovery of piperidin-4-yl-aminopyrimidines as HIV-1 reverse transcriptase inhibitors. N-benzyl derivatives with broad potency against resistant mutant viruses.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
N1-Heterocyclic pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
N1-Alkyl pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Nucleotide-dependent conformational change governs specificity and analog discrimination by HIV reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Structural basis for the inhibition of RNase H activity of HIV-1 reverse transcriptase by RNase H active site-directed inhibitors.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Structural basis for the inhibition of RNase H activity of HIV-1 reverse transcriptase by RNase H active site-directed inhibitors.
|
RNase H
|
Yes
|
|
HIV RT
|
Crystal Structure of HIV-1 Reverse Transcriptase Bound to a Non-Nucleoside Inhibitor with a Novel Mechanism of Action.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Crystallographic study of a novel subnanomolar inhibitor provides insight on the binding interactions of alkenyldiarylmethanes with human immunodeficiency virus-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Substituted tetrahydroquinolines as potent allosteric inhibitors of reverse transcriptase and its key mutants.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Structure of HIV-1 reverse transcriptase with the inhibitor beta-Thujaplicinol bound at the RNase H active site.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Structure of HIV-1 reverse transcriptase with the inhibitor beta-Thujaplicinol bound at the RNase H active site.
|
RNase H
|
Yes
|
|
HIV RT
|
HIV-1 reverse transcriptase structure with RNase H inhibitor dihydroxy benzoyl naphthyl hydrazone bound at a novel site.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
HIV-1 reverse transcriptase structure with RNase H inhibitor dihydroxy benzoyl naphthyl hydrazone bound at a novel site.
|
RNase H
|
Yes
|
|
HIV RT
|
Human immunodeficiency virus type 1 reverse transcriptase: spatial and temporal relationship between the polymerase and RNase H activities.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Human immunodeficiency virus type 1 reverse transcriptase: spatial and temporal relationship between the polymerase and RNase H activities.
|
Terminal Transferase
|
Unspecified
|
|
HIV RT
|
Human immunodeficiency virus type 1 reverse transcriptase: spatial and temporal relationship between the polymerase and RNase H activities.
|
RNase H
|
Yes
|
|
HIV RT
|
Reverse transcriptase.RNase H from the human immunodeficiency virus. Relationship of the DNA polymerase and RNA hydrolysis activities.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
HP 0.35, a cephalosporin degradation product is a specific inhibitor of lentiviral RNAses H.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
HP 0.35, a cephalosporin degradation product is a specific inhibitor of lentiviral RNAses H.
|
RNase H
|
Yes
|
|
HIV RT
|
Lersivirine: a Non-Nucleoside Reverse Transcriptase Inhibitor with Activity against Drug-Resistant Human Immunodeficiency Virus-1.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Structural basis for the role of the K65R mutation in HIV-1 reverse transcriptase polymerization, excision antagonism, and tenofovir resistance.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Discovery and optimization of pyridazinone non-nucleoside inhibitors of HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Triazole derivatives as non-nucleoside inhibitors of HIV-1 reverse transcriptase--structure-activity relationships and crystallographic analysis.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Design of annulated pyrazoles as inhibitors of HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Acyclovir is activated into a HIV-1 reverse transcriptase inhibitor in herpesvirus-infected human tissues.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Discovery of 3-{5-[(6-amino-1H-pyrazolo[3,4-b]pyridine-3-yl)methoxy]-2-chlorophenoxy}-5 -chlorobenzonitrile (MK-4965): a potent, orally bioavailable HIV-1 non-nucleoside reverse transcriptase inhibitor with improved potency against key mutant viruses.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Structural basis for the improved drug resistance profile of new generation benzophenone non-nucleoside HIV-1 reverse transcriptase inhibitors.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
The design and synthesis of diaryl ether second generation HIV-1 non-nucleoside reverse transcriptase inhibitors (NNRTIs) with enhanced potency versus key clinical mutations.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
High-resolution structures of HIV-1 reverse transcriptase/TMC278 complexes: strategic flexibility explains potency against resistance mutations.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Novel indole-3-sulfonamides as potent HIV non-nucleoside reverse transcriptase inhibitors (NNRTIs).
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Crystal engineering of HIV-1 reverse transcriptase for structure-based drug design.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
3'-Azido-3'-deoxythymidine-(5')-tetraphospho-(5')-adenosine, the product of ATP-mediated excision of chain-terminating AZTMP, is a potent chain-terminating substrate for HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
The pyrophosphate analogue foscarnet traps the pre-translocational state of HIV-1 reverse transcriptase in a Brownian ratchet model of polymerase translocation.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
HIV-1 reverse transcriptase inhibitors.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Relationship of potency and resilience to drug resistant mutations for GW420867X revealed by crystal structures of inhibitor complexes for wild-type, Leu100Ile, Lys101Glu, and Tyr188Cys mutant HIV-1 reverse transcriptases.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
2'-Deoxy-4'-C-ethynyl-2-fluoroadenosine: a nucleoside reverse transcriptase inhibitor with highly potent activity against all HIV-1 strains, favorable toxic profiles and stability in plasma.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Indolopyridones inhibit human immunodeficiency virus reverse transcriptase with a novel mechanism of action.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Effects of nucleotides and nucleotide analogue inhibitors of HIV-1 reverse transcriptase in a ratchet model of polymerase translocation.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Crystal structures for HIV-1 reverse transcriptase in complexes with three pyridinone derivatives: a new class of non-nucleoside inhibitors effective against a broad range of drug-resistant strains.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Crystal structures for HIV-1 reverse transcriptase in complexes with three pyridinone derivatives: a new class of non-nucleoside inhibitors effective against a broad range of drug-resistant strains.
|
Associated condition
|
HIV
|
|
HIV RT
|
TMC125, a novel next-generation nonnucleoside reverse transcriptase inhibitor active against nonnucleoside reverse transcriptase inhibitor-resistant human immunodeficiency virus type 1.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
TMC125, a novel next-generation nonnucleoside reverse transcriptase inhibitor active against nonnucleoside reverse transcriptase inhibitor-resistant human immunodeficiency virus type 1.
|
Associated condition
|
HIV
|
|
HIV RT
|
Nucleoside-analog resistance mutations in HIV-1 reverse transcriptase and their influence on polymerase fidelity and viral mutation rates.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Nucleoside-analog resistance mutations in HIV-1 reverse transcriptase and their influence on polymerase fidelity and viral mutation rates.
|
Associated condition
|
HIV
|
|
HIV RT
|
Biochemical and mechanistic basis for the activity of nucleoside analogue inhibitors of HIV reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Biochemical and mechanistic basis for the activity of nucleoside analogue inhibitors of HIV reverse transcriptase.
|
Associated condition
|
HIV
|
|
HIV RT
|
Nonnucleoside inhibitor binding affects the interactions of the fingers subdomain of human immunodeficiency virus type 1 reverse transcriptase with DNA.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Nonnucleoside inhibitor binding affects the interactions of the fingers subdomain of human immunodeficiency virus type 1 reverse transcriptase with DNA.
|
Associated condition
|
HIV
|
|
HIV RT
|
Design of non-nucleoside inhibitors of HIV-1 reverse transcriptase with improved drug resistance properties. 2.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Design of non-nucleoside inhibitors of HIV-1 reverse transcriptase with improved drug resistance properties. 2.
|
Associated condition
|
HIV
|
|
HIV RT
|
Nucleoside and nucleotide analogue reverse transcriptase inhibitors: a clinical review of antiretroviral resistance.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Nucleoside and nucleotide analogue reverse transcriptase inhibitors: a clinical review of antiretroviral resistance.
|
Associated condition
|
HIV
|
|
HIV RT
|
Probing the mechanistic consequences of 5-fluorine substitution on cytidine nucleotide analogue incorporation by HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Probing the mechanistic consequences of 5-fluorine substitution on cytidine nucleotide analogue incorporation by HIV-1 reverse transcriptase.
|
Associated condition
|
HIV
|
|
HIV RT
|
Perspectives on the molecular mechanism of inhibition and toxicity of nucleoside analogs that target HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Perspectives on the molecular mechanism of inhibition and toxicity of nucleoside analogs that target HIV-1 reverse transcriptase.
|
Associated condition
|
HIV
|
|
HIV RT
|
Substitutions of Phe61 located in the vicinity of template 5'-overhang influence polymerase fidelity and nucleoside analog sensitivity of HIV-1 reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Substitutions of Phe61 located in the vicinity of template 5'-overhang influence polymerase fidelity and nucleoside analog sensitivity of HIV-1 reverse transcriptase.
|
Associated condition
|
HIV
|
|
HIV RT
|
Exploring the effects of active site constraints on HIV-1 reverse transcriptase DNA polymerase fidelity.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Exploring the effects of active site constraints on HIV-1 reverse transcriptase DNA polymerase fidelity.
|
Associated condition
|
HIV
|
|
HIV RT
|
Study on steady-state kinetics of nucleotide analogues incorporation by non-gel CE.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases.
|
Molecular Weight
|
66kD
|
|
HIV RT
|
Comparison of DNA polymerase activities between recombinant feline immunodeficiency and leukemia virus reverse transcriptases.
|
Overall Error Rate
|
0.0005 errors/bp
|
|
HIV RT
|
Purification and partial characterization of equine infectious anemia virus reverse transcriptase.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Purification and partial characterization of equine infectious anemia virus reverse transcriptase.
|
3-5' Exonuclease (proofreading)
|
No
|
|
HIV RT
|
Purification and partial characterization of equine infectious anemia virus reverse transcriptase.
|
Nucleotide Substitution Rate
|
0.003155 errors/bp
|
|
HIV RT
|
Purification and partial characterization of equine infectious anemia virus reverse transcriptase.
|
Nucleotide Substitution Rate
|
0.001477 errors/bp
|
|
HIV RT
|
Purification and partial characterization of equine infectious anemia virus reverse transcriptase.
|
Full length or truncated
|
Full length
|
|
HIV RT
|
Purification and partial characterization of equine infectious anemia virus reverse transcriptase.
|
RNase H
|
Yes
|
|
HIV RT
|
In vitro fidelity of the prototype primate foamy virus (PFV) RT compared to HIV-1 RT.
|
Frameshift Error Rate
|
8E-06 errors/bp
|
|
HIV RT
|
In vitro fidelity of the prototype primate foamy virus (PFV) RT compared to HIV-1 RT.
|
Overall Error Rate
|
7.5E-05 errors/bp
|
|
HIV RT
|
In vitro fidelity of the prototype primate foamy virus (PFV) RT compared to HIV-1 RT.
|
Nucleotide Substitution Rate
|
6.3E-05 errors/bp
|
|
HIV RT
|
In vitro fidelity of the prototype primate foamy virus (PFV) RT compared to HIV-1 RT.
|
Full length or truncated
|
Full length
|
|
HIV RT
|
Fidelity of DNA synthesis catalyzed by human DNA polymerase alpha and HIV-1 reverse transcriptase: effect of reaction pH.
|
3-5' Exonuclease (proofreading)
|
No
|
|
HIV RT
|
Fidelity of DNA synthesis catalyzed by human DNA polymerase alpha and HIV-1 reverse transcriptase: effect of reaction pH.
|
Cloned or native
|
Cloned in E. coli
|
|
HIV RT
|
Fidelity of DNA synthesis catalyzed by human DNA polymerase alpha and HIV-1 reverse transcriptase: effect of reaction pH.
|
Nucleotide Substitution Rate
|
2.63E-05 errors/bp
|
Technique: Reversion (pH 6.5)
|
HIV RT
|
Fidelity of DNA synthesis catalyzed by human DNA polymerase alpha and HIV-1 reverse transcriptase: effect of reaction pH.
|
Nucleotide Substitution Rate
|
0.00027 errors/bp
|
Technique: Reversion (pH 8.0)
|
HIV RT
|
Fidelity of DNA synthesis catalyzed by human DNA polymerase alpha and HIV-1 reverse transcriptase: effect of reaction pH.
|
Full length or truncated
|
Full length
|
|
HIV RT
|
Fidelity of DNA synthesis catalyzed by human DNA polymerase alpha and HIV-1 reverse transcriptase: effect of reaction pH.
|
Specific Activity
|
1 umol/min/mg
|
|
HIV RT
|
Mutation Rates and Intrinsic Fidelity of Retroviral Reverse Transcriptases
|
Frameshift Error Rate
|
0.00023 errors/bp
|
|
HIV RT
|
Fidelity of the reverse transcriptase of human immunodeficiency virus type 2.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Fidelity of the reverse transcriptase of human immunodeficiency virus type 2.
|
3-5' Exonuclease (proofreading)
|
No
|
|
HIV RT
|
Analyzing fidelity of DNA polymerases.
|
Frameshift Error Rate
|
0.0047 errors/bp
|
Technique: Reversion
|
HIV RT
|
Analyzing fidelity of DNA polymerases.
|
Overall Error Rate
|
0.08 errors/bp
|
Technique: M13mp2 forward mutation assay
|
HIV RT
|
Analyzing fidelity of DNA polymerases.
|
Overall Error Rate
|
0.0001 errors/bp
|
Technique: M13mp2 opal codon reversion assay
|
HIV RT
|
Crystal structures of HIV-1 reverse transcriptase with etravirine (TMC125) and rilpivirine (TMC278): implications for drug design.
|
Reverse Transcriptase Activity
|
No
|
|
HIV RT
|
Crystal structures of HIV-1 reverse transcriptase with etravirine (TMC125) and rilpivirine (TMC278): implications for drug design.
|
Associated condition
|
HIV
|
|
HIV RT
|
Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex.
|
Polymerase Catalytic Residue Amino Acids
|
D110, D185, D186
|
|
HIV RT
|
Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex.
|
Incorporation of non-standard nucleotides
|
Unspecified
|
|
HIV RT
|
Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex.
|
Cloned or native
|
Cloned in E. coli
|
|
HIV RT
|
Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex.
|
Tagged
|
Yes
|
|
HIV RT
|
Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex.
|
Tag Name
|
his
|
|
HIV RT
|
Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex.
|
Residues Involved in Catalysis of RNase H
|
D443, E478, D498, D549
|
|
HIV RT
|
Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex.
|
Full length or truncated
|
Full length
|
|
HIV RT
|
N348I in the connection domain of HIV-1 reverse transcriptase confers zidovudine and nevirapine resistance.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
N348I in the connection domain of HIV-1 reverse transcriptase confers zidovudine and nevirapine resistance.
|
Cloned or native
|
Cloned in E. coli
|
|
HIV RT
|
N348I in the connection domain of HIV-1 reverse transcriptase confers zidovudine and nevirapine resistance.
|
Tagged
|
Yes
|
|
HIV RT
|
N348I in the connection domain of HIV-1 reverse transcriptase confers zidovudine and nevirapine resistance.
|
Tag Name
|
histidine
|
|
HIV RT
|
N348I in the connection domain of HIV-1 reverse transcriptase confers zidovudine and nevirapine resistance.
|
Full length or truncated
|
Full length
|
|
HIV RT
|
N348I in the connection domain of HIV-1 reverse transcriptase confers zidovudine and nevirapine resistance.
|
RNase H
|
Yes
|
|
HIV RT
|
N348I in the connection domain of HIV-1 reverse transcriptase confers zidovudine and nevirapine resistance.
|
Storage requirements
|
50% glycerol -20oC
|
|
HIV RT
|
Design of non-nucleoside inhibitors of HIV-1 reverse transcriptase with improved drug resistance properties. 1.
|
Reverse Transcriptase Activity
|
Yes
|
|
HIV RT
|
Design of non-nucleoside inhibitors of HIV-1 reverse transcriptase with improved drug resistance properties. 1.
|
Associated condition
|
HIV
|
|