Nucleic acids research

(Nucleic Acids Res) ISSNs: , 1362-4962

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Title	Authors	Year
Acyclic and dideoxy terminator preferences denote divergent sugar recognition by archaeon and Taq DNA polymerases.	Gardner AF, Jack WE	2002
Further studies on partially purified calf thymus DNA polymerase a.	McKune K, Holmes AM	1979
Protein splicing removes intervening sequences in an archaea DNA polymerase.	Hodges RA, Perler FB, Noren CJ, Jack WE	1992
MIP1 DNA polymerase of S. cerevisiae: structural similarity with the E. coli DNA polymerase I-type enzymes.	Blanco L, Bernad A, Salas M	1991
The high fidelity and unique error signature of human DNA polymerase epsilon.	Korona DA, Lecompte KG, Pursell ZF	2011
Optimal conditions to use Pfu exo(-) DNA polymerase for highly efficient ligation-mediated polymerase chain reaction protocols.	Angers M, Cloutier JF, Castonguay A, Drouin R	2001
PCR performance of the B-type DNA polymerase from the thermophilic euryarchaeon Thermococcus aggregans improved by mutations in the Y-GG/A motif.	Böhlke K, Pisani FM, Vorgias CE, Frey B, Sobek H, Rossi M, Antranikian G	2000
S1 plasmid from cms-S-maize mitochondria encodes a viral type DNA-polymerase.	Kuzmin EV, Levchenko IV	1987
Comparison of single regulated lentiviral vectors with rtTA expression driven by an autoregulatory loop or a constitutive promoter.	Markusic D, Oude-Elferink R, Das AT, Berkhout B, Seppen J	2005
Aphidicolin inhibits DNA polymerase II of Escherichia coli, an alpha-like DNA polymerase.	Chen H, Lawrence CB, Bryan SK, Moses RE	1990
The effects of the ring fragmentation product of thymidine C5-hydrate on phosphodiesterases and klenow (exo-) fragment.	Matray TJ, Haxton KJ, Greenberg MM	1995
The effect of bisulfite modification on the template activity of DNA for DNA polymerase I.	Kai K, Tsuruo T, Hayatsu H	1974
Compilation, alignment, and phylogenetic relationships of DNA polymerases.	Braithwaite DK, Ito J	1993
Specific inhibitors of eukaryotic DNA synthesis and DNA polymerase alpha, 3-deoxyaphidicolin and aphidicolin-17-monoacetate.	Haraguchi T, Oguro M, Nagano H, Ichihara A, Sakamura S	1983
The accessory subunit of mitochondrial DNA polymerase gamma determines the DNA content of mitochondrial nucleoids in human cultured cells.	Di Re M, Sembongi H, He J, Reyes A, Yasukawa T, Martinsson P, Bailey LJ, Goffart S, Boyd-Kirkup JD, Wong TS, Fersht AR, Spelbrink JN, Holt IJ	2009
Single-nucleotide base excision repair DNA polymerase activity in C. elegans in the absence of DNA polymerase {beta}	Asagoshi K, Lehmann W, Braithwaite EK, Santana-Santos L, Prasad R, Freedman JH, Van Houten B, Wilson SH	2011
Molecular architecture of a multifunctional MCM complex.	Sanchez-Berrondo J, Mesa P, Ibarra A, Martínez-Jiménez MI, Blanco L, Méndez J, Boskovic J, Montoya G	2011
The DNA polymerase gene from the hyperthermophilic marine archaebacterium, Pyrococcus furiosus, shows sequence homology with alpha-like DNA polymerases.	Mathur EJ, Adams MW, Callen WN, Cline JM	1991
Analysis and suppression of DNA polymerase pauses associated with a trinucleotide consensus.	Mytelka DS, Chamberlin MJ	1996
Interactions of calf thymus DNA polymerase alpha with primer/templates.	Thompson HC, Sheaff RJ, Kuchta RD	1995
Apparent stimulation of calf thymus DNA polymerase alpha by ATP.	Tan CK, So MJ, Downey KM, So AG	1987
Promiscuous DNA synthesis by human DNA polymerase θ	Hogg M, Sauer-Eriksson AE, Johansson E	2011
Epstein-Barr virus-encoded microRNA miR-BART2 down-regulates the viral DNA polymerase BALF5.	Barth S, Pfuhl T, Mamiani A, Ehses C, Roemer K, Kremmer E, Jäker C, Höck J, Meister G, Grässer FA	2008
On the fidelity of DNA polymerase alpha: the influence of alpha-thio dNTPs, Mn2+ and mismatch repair.	Rienitz A, Grosse F, Blöcker H, Frank R, Krauss G	1985
Identification of delta helicase as the bovine homolog of HUPF1: demonstration of an interaction with the third subunit of DNA polymerase delta.	Carastro LM, Tan CK, Selg M, Jack HM, So AG, Downey KM	2002
Taq DNA polymerase slippage mutation rates measured by PCR and quasi-likelihood analysis: (CA/GT)n and (A/T)n microsatellites.	Shinde D, Lai Y, Sun F, Arnheim N	2003
Evolution of internal eliminated segments and scrambling in the micronuclear gene encoding DNA polymerase alpha in two Oxytricha species.	Hoffman DC, Prescott DM	1997
Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors.	Klumpp K, Hang JQ, Rajendran S, Yang Y, Derosier A, Wong Kai In P, Overton H, Parkes KE, Cammack N, Martin JA	2003
DNA polymerase alpha and models for proofreading.	Abbotts J, Loeb LA	1985
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template.	Kopp EB, Miglietta JJ, Shrutkowski AG, Shih CK, Grob PM, Skoog MT	1991
The proofreading domain of Escherichia coli DNA polymerase I and other DNA and/or RNA exonuclease domains.	Moser MJ, Holley WR, Chatterjee A, Mian IS	1997
The Bloom's syndrome helicase (BLM) interacts physically and functionally with p12, the smallest subunit of human DNA polymerase delta.	Selak N, Bachrati CZ, Shevelev IV, Dietschy T, van Loon B, Jacob A, Hübscher U, Hoheisel JD, Hickson ID, Stagljar I	2008
Further characterization of a cell-free system for measuring replicative and repair DNA synthesis with cultured human fibroblasts and evidence for the involvement of DNA polymerase alpha in DNA repair.	Ciarrocchi G, Jose JG, Linn S	1979
Evolutionary clues to DNA polymerase III beta clamp structural mechanisms.	Neuwald AF	2003
Site-directed mutagenesis analysis of the structural interaction of the single-strand-break repair protein, X-ray cross-complementing group 1, with DNA polymerase beta.	Marintchev A, Gryk MR, Mullen GP	2003
A new anti conformation for N-(deoxyguanosin-8-yl)-2-acetylaminofluorene (AAF-dG) allows Watson-Crick pairing in the Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4).	Wang L, Broyde S	2006
A novel DNA polymerase homologous to Escherichia coli DNA polymerase I from a higher plant, rice (Oryza sativa L.).	Kimura S, Uchiyama Y, Kasai N, Namekawa S, Saotome A, Ueda T, Ando T, Ishibashi T, Oshige M, Furukawa T, Yamamoto T, Hashimoto J, Sakaguchi K	2002
The fidelity of DNA synthesis by yeast DNA polymerase zeta alone and with accessory proteins.	Zhong X, Garg P, Stith CM, Nick McElhinny SA, Kissling GE, Burgers PM, Kunkel TA	2006
Butylanilinouracil: a selective inhibitor of HeLa cell DNA synthesis and HeLa cell DNA polymerase alpha.	Wright GE, Baril EF, Brown NC	1980
Slippage of DNA polymerase I during synthesis of ds-cDNA.	Devos R, Tavernier J, Fiers W	1988
Betalactam antibiotics interfere with eukaryotic DNA-replication by inhibiting DNA polymerase alpha.	Do UH, Neftel KA, Spadari S, Hübscher U	1987
The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases delta and eta.	McCulloch SD, Kokoska RJ, Garg P, Burgers PM, Kunkel TA	2009
Elongation of repetitive DNA by DNA polymerase from a hyperthermophilic bacterium Thermus thermophilus.	Ogata N, Morino H	2000
Cold-sensitive mutants of Taq DNA polymerase provide a hot start for PCR.	Kermekchiev MB, Tzekov A, Barnes WM	2003
Site-directed mutagenesis in the DNA linking site of bacteriophage phi 29 terminal protein: isolation and characterization of a Ser232----Thr mutant.	Garmendia C, Salas M, Hermoso JM	1988
Solution structures of 2 : 1 and 1 : 1 DNA polymerase-DNA complexes probed by ultracentrifugation and small-angle X-ray scattering.	Tang KH, Niebuhr M, Aulabaugh A, Tsai MD	2008
Phi29 DNA polymerase residues Tyr59, His61 and Phe69 of the highly conserved ExoII motif are essential for interaction with the terminal protein.	Eisenbrandt R, Lázaro JM, Salas M, de Vega M	2002
Error-prone lesion bypass by human DNA polymerase eta.	Zhang Y, Yuan F, Wu X, Rechkoblit O, Taylor JS, Geacintov NE, Wang Z	2000
Involvement of the TPR2 subdomain movement in the activities of phi29 DNA polymerase.	Rodríguez I, Lázaro JM, Salas M, de Vega M	2009
A neutralizing antibody against human DNA polymerase epsilon inhibits cellular but not SV40 DNA replication.	Pospiech H, Kursula I, Abdel-Aziz W, Malkas L, Uitto L, Kastelli M, Vihinen-Ranta M, Eskelinen S, Syväoja JE	1999
A rapid and efficient one-tube PCR-based mutagenesis technique using Pfu DNA polymerase.	Picard V, Ersdal-Badju E, Lu A, Bock SC	1994
Crystal structures of oligonucleotides including the integrase processing site of the Moloney murine leukemia virus.	Montaño SP, Coté ML, Roth MJ, Georgiadis MM	2006
The incorporation of O6-methyldeoxyguanosine and O4-methyldeoxythymidine monophosphates into DNA by DNA polymerases I and alpha.	Hall JA, Saffhill R	1983
5-Hydroxypyrimidine deoxynucleoside triphosphates are more efficiently incorporated into DNA by exonuclease-free Klenow fragment than 8-oxopurine deoxynucleoside triphosphates.	Purmal AA, Kow YW, Wallace SS	1994
The effect of the 3',5' thiophosphoryl linkage on the exonuclease activities of T4 polymerase and the Klenow fragment.	Gupta AP, Benkovic PA, Benkovic SJ	1984
A real-time fluorescence method for enzymatic characterization of specialized human DNA polymerases.	Dorjsuren D, Wilson DM, Beard WA, McDonald JP, Austin CP, Woodgate R, Wilson SH, Simeonov A	2009
Loop II of DNA polymerase beta is important for polymerization activity and fidelity.	Lin GC, Jaeger J, Sweasy JB	2007
Mammalian cyclin/PCNA (DNA polymerase delta auxiliary protein) stimulates processive DNA synthesis by yeast DNA polymerase III.	Burgers PM	1988
Binding of phage Phi29 architectural protein p6 to the viral genome: evidence for topological restriction of the phage linear DNA.	González-Huici V, Alcorlo M, Salas M, Hermoso JM	2004
Two regions in human DNA polymerase beta mRNA suppress translation in Escherichia coli.	Date T, Tanihara K, Yamamoto S, Nomura N, Matsukage A	1992
Extension of base mispairs by Taq DNA polymerase: implications for single nucleotide discrimination in PCR.	Huang MM, Arnheim N, Goodman MF	1992
Involvement of phi29 DNA polymerase thumb subdomain in the proper coordination of synthesis and degradation during DNA replication.	Pérez-Arnaiz P, Lázaro JM, Salas M, de Vega M	2006
A positively charged residue of phi29 DNA polymerase, highly conserved in DNA polymerases from families A and B, is involved in binding the incoming nucleotide.	Truniger V, Lázaro JM, Esteban FJ, Blanco L, Salas M	2002
Function of the C-terminus of phi29 DNA polymerase in DNA and terminal protein binding.	Truniger V, Lázaro JM, Salas M	2004
Structure and expression during development of Drosophila melanogaster gene for DNA polymerase alpha.	Hirose F, Yamaguchi M, Nishida Y, Masutani M, Miyazawa H, Hanaoka F, Matsukage A	1991
Rat DNA polymerase beta gene can join in excision repair of Escherichia coli.	Ohnishi T, Yuba S, Date T, Utsumi H, Matsukage A	1990
Mismatched dNTP incorporation by DNA polymerase beta does not proceed via globally different conformational pathways.	Tang KH, Niebuhr M, Tung CS, Chan HC, Chou CC, Tsai MD	2008
Synchronization of HeLa cell cultures by inhibition of DNA polymerase alpha with aphidicolin.	Pedrali-Noy G, Spadari S, Miller-Faurès A, Miller AO, Kruppa J, Koch G	1980
Cleavage of adenine-modified functionalized DNA by type II restriction endonucleases.	Macícková-Cahová H, Hocek M	2009
Fluorescence of 2-aminopurine reveals rapid conformational changes in the RB69 DNA polymerase-primer/template complexes upon binding and incorporation of matched deoxynucleoside triphosphates.	Zhang H, Cao W, Zakharova E, Konigsberg WH, De La Cruz EM	2007
Selection of template initiation sites and the lengths of RNA primers synthesized by DNA primase are strongly affected by its organization in a multiprotein DNA polymerase alpha complex.	Vishwanatha JK, Yamaguchi M, DePamphilis ML, Baril EF	1986
Enzymatic switching for efficient and accurate translesion DNA replication.	McCulloch SD, Kokoska RJ, Chilkova O, Welch CM, Johansson E, Burgers PM, Kunkel TA	2004
Role of DNA polymerase eta in the bypass of abasic sites in yeast cells.	Zhao B, Xie Z, Shen H, Wang Z	2004
Effect of 2',3'-dideoxythymidine-5'-triphosphate on HeLa cell in vitro DNA synthesis: evidence that DNA polymerase alpha is the only polymerase required for cellular DNA replication.	Waqar MA, Evans MJ, Huberman JA	1978
Evidences for the function of DNA polymerase-beta in unscheduled DNA synthesis.	Wawra E, Dolejs I	1979
Calf thymus DNA polymerase delta: purification, biochemical and functional properties of the enzyme after its separation from DNA polymerase alpha, a DNA dependent ATPase and proliferating cell nuclear antigen.	Focher F, Spadari S, Ginelli B, Hottiger M, Gassmann M, Hübscher U	1988
Low-fidelity DNA synthesis by the L979F mutator derivative of Saccharomyces cerevisiae DNA polymerase zeta.	Stone JE, Kissling GE, Lujan SA, Rogozin IB, Stith CM, Burgers PM, Kunkel TA	2009
Analysis of inhibitors of bacteriophage T4 DNA polymerase.	Khan NN, Reha-Krantz LJ, Wright GE	1994
Purification and characterization of porcine liver DNA polymerase gamma: utilization of dUTP and dTTP during in vitro DNA synthesis.	Mosbaugh DW	1988
Human DNA polymerase theta possesses 5'-dRP lyase activity and functions in single-nucleotide base excision repair in vitro.	Prasad R, Longley MJ, Sharief FS, Hou EW, Copeland WC, Wilson SH	2009
The proofreading exonuclease subunit epsilon of Escherichia coli DNA polymerase III is tethered to the polymerase subunit alpha via a flexible linker.	Ozawa K, Jergic S, Park AY, Dixon NE, Otting G	2008
Proofreading exonuclease activity of human DNA polymerase delta and its effects on lesion-bypass DNA synthesis.	Fazlieva R, Spittle CS, Morrissey D, Hayashi H, Yan H, Matsumoto Y	2009
Molecular basis for the enantioselectivity of HIV-1 reverse transcriptase: role of the 3'-hydroxyl group of the L-(beta)-ribose in chiral discrimination between D- and L-enantiomers of deoxy- and dideoxy-nucleoside triphosphate analogs.	Maga G, Amacker M, Hübscher U, Gosselin G, Imbach JL, Mathé C, Faraj A, Sommadossi JP, Spadari S	1999
Enzymatic properties of rat DNA polymerase beta mutants obtained by randomized mutagenesis.	Skandalis A, Loeb LA	2001
Thymine glycols and urea residues in M13 DNA constitute replicative blocks in vitro.	Ide H, Kow YW, Wallace SS	1985
Human DNA polymerase kappa synthesizes DNA with extraordinarily low fidelity.	Zhang Y, Yuan F, Xin H, Wu X, Rajpal DK, Yang D, Wang Z	2000
A sensitive scanning technology for low frequency nuclear point mutations in human genomic DNA.	Li-Sucholeiki XC, Thilly WG	2000
Methylglyoxal, an endogenous aldehyde, crosslinks DNA polymerase and the substrate DNA.	Murata-Kamiya N, Kamiya H	2001
Misincorporation of dAMP opposite 2-hydroxyadenine, an oxidative form of adenine.	Kamiya H, Ueda T, Ohgi T, Matsukage A, Kasai H	1995
Misincorporation during DNA synthesis, analyzed by gel electrophoresis.	Hillebrand GG, McCluskey AH, Abbott KA, Revich GG, Beattie KL	1984
Functional association of poly(ADP-ribose) polymerase with DNA polymerase alpha-primase complex: a link between DNA strand break detection and DNA replication.	Dantzer F, Nasheuer HP, Vonesch JL, de Murcia G, Ménissier-de Murcia J	1998
Mechanistic consequences of temperature on DNA polymerization catalyzed by a Y-family DNA polymerase.	Fiala KA, Sherrer SM, Brown JA, Suo Z	2008
Differential discrimination of DNA polymerase for variants of the non-standard nucleobase pair between xanthosine and 2,4-diaminopyrimidine, two components of an expanded genetic alphabet.	Lutz MJ, Held HA, Hottiger M, Hübscher U, Benner SA	1996
Strategic down-regulation of DNA polymerase beta by antisense RNA sensitizes mammalian cells to specific DNA damaging agents.	Horton JK, Srivastava DK, Zmudzka BZ, Wilson SH	1995
High fidelity DNA synthesis by the Thermus aquaticus DNA polymerase.	Eckert KA, Kunkel TA	1990
DNA polymerase I and a protein complex bind specifically to E. coli palindromic unit highly repetitive DNA: implications for bacterial chromosome organization.	Gilson E, Perrin D, Hofnung M	1990
RPA and PCNA suppress formation of large deletion errors by yeast DNA polymerase delta.	Fortune JM, Stith CM, Kissling GE, Burgers PM, Kunkel TA	2006
The checkpoint clamp, Rad9-Rad1-Hus1 complex, preferentially stimulates the activity of apurinic/apyrimidinic endonuclease 1 and DNA polymerase beta in long patch base excision repair.	Gembka A, Toueille M, Smirnova E, Poltz R, Ferrari E, Villani G, Hübscher U	2007
Sequence determination of nucleic acids containing 5-methylisocytosine and isoguanine: identification and insight into polymerase replication of the non-natural nucleobases.	Ahle JD, Barr S, Chin AM, Battersby TR	2005
Following an environmental carcinogen N2-dG adduct through replication: elucidating blockage and bypass in a high-fidelity DNA polymerase.	Xu P, Oum L, Beese LS, Geacintov NE, Broyde S	2007
Translesional synthesis on a DNA template containing N2-methyl-2'-deoxyguanosine catalyzed by the Klenow fragment of Escherichia coli DNA polymerase I.	Yasui M, Matsui S, Ihara M, Laxmi YR, Shibutani S, Matsuda T	2001
Assembly of DNA polymerase delta and epsilon holoenzymes depends on the geometry of the DNA template.	Podust LM, Podust VN, Floth C, Hübscher U	1994
Purification and characterization of a DNA polymerase from the cyanobacterium Anacystis nidulans R2.	Lin HJ, Cannon GC, Heinhorst S	1990
Characterization of the 3' exonuclease subunit DP1 of Methanococcus jannaschii replicative DNA polymerase D.	Jokela M, Eskelinen A, Pospiech H, Rouvinen J, Syväoja JE	2004
Solution structure of Domains IVa and V of the tau subunit of Escherichia coli DNA polymerase III and interaction with the alpha subunit.	Su XC, Jergic S, Keniry MA, Dixon NE, Otting G	2007
Regulation of B family DNA polymerase fidelity by a conserved active site residue: characterization of M644W, M644L and M644F mutants of yeast DNA polymerase epsilon.	Pursell ZF, Isoz I, Lundström EB, Johansson E, Kunkel TA	2007
Translesion synthesis of acetylaminofluorene-dG adducts by DNA polymerase zeta is stimulated by yeast Rev1 protein.	Guo D, Xie Z, Shen H, Zhao B, Wang Z	2004
Human replication protein A can suppress the intrinsic in vitro mutator phenotype of human DNA polymerase lambda.	Maga G, Shevelev IV, Villani G, Spadari S, Hübscher U	2006
The inhibition of mitochondrial DNA polymerase gamma from animal cells by intercalating drugs.	Tarrago-Litvak L, Viratelle O, Darriet D, Dalibart R, Graves PV, Litvak S	1978
Polbase: a repository of biochemical, genetic and structural information about DNA polymerases.	Langhorst BW, Jack WE, Reha-Krantz L, Nichols NM	2011
The Werner syndrome protein operates in base excision repair and cooperates with DNA polymerase beta.	Harrigan JA, Wilson DM, Prasad R, Opresko PL, Beck G, May A, Wilson SH, Bohr VA	2006
Characterization of DNA polymerase beta mRNA: cell-cycle and growth response in cultured human cells.	Zmudzka BZ, Fornace A, Collins J, Wilson SH	1988
Structural and functional similarities of prokaryotic and eukaryotic DNA polymerase sliding clamps.	Kelman Z, O'Donnell ME	1995
Mutations in the herpes simplex virus DNA polymerase gene conferring hypersensitivity to aphidicolin.	Coen DM, Furman PA, Aschman DP, Schaffer PA	1983
Selective inhibition of HIV-1 reverse transcriptase-associated ribonuclease H activity by hydroxylated tropolones.	Budihas SR, Gorshkova I, Gaidamakov SA, Wamiru A, Bona MK, Parniak MA, Crouch RJ, McMahon JB, Beutler JA, Le Grice SF	2005
Thymine glycol lesions terminate chain elongation by DNA polymerase I in vitro.	Clark JM, Beardsley GP	1986
Mutagenesis of human DNA polymerase lambda: essential roles of Tyr505 and Phe506 for both DNA polymerase and terminal transferase activities.	Shevelev IV, Blanca G, Villani G, Ramadan K, Spadari S, Hübscher U, Maga G	2003
Adenovirus DNA polymerase: domain organisation and interaction with preterminal protein.	Parker EJ, Botting CH, Webster A, Hay RT	1998
Persistence of DNA synthesis arrest sites in the presence of T4 DNA polymerase and T4 gene 32, 44, 45 and 62 DNA polymerase accessory proteins.	Charette MF, Weaver DT, DePamphilis ML	1986
Kinetics of error generation in homologous B-family DNA polymerases.	Hogg M, Cooper W, Reha-Krantz LJ, Wallace SS	2006
The N-clasp of human DNA polymerase kappa promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions.	Jia L, Geacintov NE, Broyde S	2008
DNA and RNA-DNA annealing activity associated with the tau subunit of the Escherichia coli DNA polymerase III holoenzyme.	Kim S, Marians KJ	1995
N4-Methoxydeoxycytidine triphosphate is in the imino tautomeric form and substitutes for deoxythymidine triphosphate in primed poly d[A-T] synthesis with E. coli DNA polymerase I.	Singer B, Fraenkel-Conrat H, Abbott LG, Spengler SJ	1984
The 3'-5' proofreading exonuclease of archaeal family-B DNA polymerase hinders the copying of template strand deaminated bases.	Russell HJ, Richardson TT, Emptage K, Connolly BA	2009
Genetics of lagging strand DNA synthesis and maturation in fission yeast: suppression analysis links the Dna2-Cdc24 complex to DNA polymerase delta.	Tanaka H, Ryu GH, Seo YS, MacNeill SA	2004
DNA structure and the Werner protein modulate human DNA polymerase delta-dependent replication dynamics within the common fragile site FRA16D.	Shah SN, Opresko PL, Meng X, Lee MY, Eckert KA	2010
A specific loop in human DNA polymerase mu allows switching between creative and DNA-instructed synthesis.	Juárez R, Ruiz JF, Nick McElhinny SA, Ramsden DA, Blanco L	2006
REV1 restrains DNA polymerase zeta to ensure frame fidelity during translesion synthesis of UV photoproducts in vivo.	Szüts D, Marcus AP, Himoto M, Iwai S, Sale JE	2008
Design and characterization of N2-arylaminopurines which selectively inhibit replicative DNA synthesis and replication-specific DNA polymerases: guanine derivatives active on mammalian DNA polymerase alpha and bacterial DNA polymerase III.	Wright GE, Baril EF, Brown VM, Brown NC	1982
In vitro conversion of MVM parvovirus single-stranded DNA to the replicative form by DNA polymerase alpha from Ehrlich ascites tumour cells.	Faust EA, Rankin CD	1982
The C-terminal zinc finger of the catalytic subunit of DNA polymerase delta is responsible for direct interaction with the B-subunit.	Sanchez Garcia J, Ciufo LF, Yang X, Kearsey SE, MacNeill SA	2004
The DNA polymerase lambda is required for the repair of non-compatible DNA double strand breaks by NHEJ in mammalian cells.	Capp JP, Boudsocq F, Bertrand P, Laroche-Clary A, Pourquier P, Lopez BS, Cazaux C, Hoffmann JS, Canitrot Y	2006
Subspecies of DNA polymerase alpha from calf thymus with different fidelity in copying synthetic template-primers.	Brosius S, Grosse F, Krauss G	1983
Human base excision repair enzymes apurinic/apyrimidinic endonuclease1 (APE1), DNA polymerase beta and poly(ADP-ribose) polymerase 1: interplay between strand-displacement DNA synthesis and proofreading exonuclease activity.	Sukhanova MV, Khodyreva SN, Lebedeva NA, Prasad R, Wilson SH, Lavrik OI	2005
8-Hydroxyguanine in a mutational hotspot of the c-Ha-ras gene causes misreplication, 'action-at-a-distance' mutagenesis and inhibition of replication.	Jałoszyński P, Masutani C, Hanaoka F, Perez AB, Nishimura S	2003
Human DNA polymerase beta polymorphism, Arg137Gln, impairs its polymerase activity and interaction with PCNA and the cellular base excision repair capacity.	Guo Z, Zheng L, Dai H, Zhou M, Xu H, Shen B	2009
Evidence implying DNA polymerase beta function in excision repair.	Siedlecki JA, Szyszko J, Pietrzykowska I, Zmudzka BZ	1980
Unique requirements for template primers of DNA polymerase beta from rat ascites hepatoma AH130 cells.	Ono K, Ohashi A, Tanabe K, Matsukage A, Nishizawa M, Takahashi T	1979
Replication of poly dA and poly rA by a drosophila DNA polymerase.	Brakel CL, Blumenthal AB	1978
Thermodynamics of the binding of Thermus aquaticus DNA polymerase to primed-template DNA.	Datta K, LiCata VJ	2003
MDM2 interacts with the C-terminus of the catalytic subunit of DNA polymerase epsilon.	Vlatkovic N, Guerrera S, Li Y, Linn S, Haines DS, Boyd MT	2000
Translesion replication of benzo[a]pyrene and benzo[c]phenanthrene diol epoxide adducts of deoxyadenosine and deoxyguanosine by human DNA polymerase iota.	Frank EG, Sayer JM, Kroth H, Ohashi E, Ohmori H, Jerina DM, Woodgate R	2002
The N-terminal region of DNA polymerase delta catalytic subunit is necessary for holoenzyme function.	Schumacher SB, Stucki M, Hübscher U	2000
Endogenous DNA polymerase activity in fractionated rat lever chromatin.	Chan JY, Rodriguez LW, Becker FF	1977
Purification and characterization of DNA polymerase from the archaebacterium Sulfolobus acidocaldarius.	Klimczak LJ, Grummt F, Burger KJ	1985
Levels of DNA polymerase-alpha and beta in normal and xeroderma pigmentosum fibroblasts.	Bertazzoni U, Stefanini M, Pedrali-Noy G, Nuzzo F, Falaschi A	1977
Synthesis and properties of oligonucleotides containing 5-formyl-2'-deoxycytidine: in vitro DNA polymerase reactions on DNA templates containing 5-formyl-2'-deoxycytidine.	Karino N, Ueno Y, Matsuda A	2001
Alterations of DNA-dependent DNA polymerase activities in the immature quail oviduct in response to estrogen stimulation.	Rohde HJ, Müller WE, Zahn RK	1975
Escherichia coli RNA and DNA polymerase bypass of dihydrouracil: mutagenic potential via transcription and replication.	Liu J, Doetsch PW	1998
The small subunits of human and mouse DNA polymerase epsilon are homologous to the second largest subunit of the yeast Saccharomyces cerevisiae DNA polymerase epsilon.	Jokela M, Mäkiniemi M, Lehtonen S, Szpirer C, Hellman U, Syväoja JE	1998
The second subunit of DNA polymerase III (delta) is encoded by the HYS2 gene in Saccharomyces cerevisiae.	Hashimoto K, Nakashima N, Ohara T, Maki S, Sugino A	1998
Molecular cloning, structure and expression of the yeast proliferating cell nuclear antigen gene.	Bauer GA, Burgers PM	1990
Development and use of an in vitro HSV-tk forward mutation assay to study eukaryotic DNA polymerase processing of DNA alkyl lesions.	Eckert KA, Hile SE, Vargo PL	1997
Studies of Schizosaccharomyces pombe DNA polymerase alpha at different stages of the cell cycle.	Park H, Davis R, Wang TS	1995
Template-switching during DNA synthesis by Thermus aquaticus DNA polymerase I.	Odelberg SJ, Weiss RB, Hata A, White R	1995
polA6, A mutation affecting the DNA binding capacity of DNA polymerase I.	Kelly WS, Grindley ND	1976
Genetic identification and nucleotide sequence of the DNA polymerase gene of African swine fever virus.	Martins A, Ribeiro G, Marques MI, Costa JV	1994
Sequences at the C-terminus of the herpes simplex virus type 1 UL30 protein are dispensable for DNA polymerase activity but not for viral origin-dependent DNA replication.	Stow ND	1993
Loop 1 modulates the fidelity of DNA polymerase {lambda}	Bebenek K, Garcia-Diaz M, Zhou RZ, Povirk LF, Kunkel TA	2010
Rapid purification of high-activity Taq DNA polymerase.	Pluthero FG	1993
Ribonucleotidyl transferase in preparations of partially purified DNA polymerase alpha of the sea urchin.	Morris PW, Racine FM	1978
Insertion of the T3 DNA polymerase thioredoxin binding domain enhances the processivity and fidelity of Taq DNA polymerase.	Davidson JF, Fox R, Harris DD, Lyons-Abbott S, Loeb LA	2003
Calf thymus RF-C as an essential component for DNA polymerase delta and epsilon holoenzymes function.	Podust VN, Georgaki A, Strack B, Hübscher U	1992
Mutants of Taq DNA polymerase resistant to PCR inhibitors allow DNA amplification from whole blood and crude soil samples.	Kermekchiev MB, Kirilova LI, Vail EE, Barnes WM	2009
Excision repair of UV-damaged plasmid DNA in Xenopus oocytes is mediated by DNA polymerase alpha (and/or delta).	Saxena JK, Hays JB, Ackerman EJ	1990
DNA sequencing with dye-labeled terminators and T7 DNA polymerase: effect of dyes and dNTPs on incorporation of dye-terminators and probability analysis of termination fragments.	Lee LG, Connell CR, Woo SL, Cheng RD, McArdle BF, Fuller CW, Halloran ND, Wilson RK	1992
Further biochemical characterization of wheat DNA primase: possible functional implication of copurification with DNA polymerase A.	Laquel P, Castroviejo M, Litvak S	1990
Mutations induced by DNA polymerase alpha upon in vitro replication of M13mp8(+) DNA.	Reckmann B, Krauss G	1986
Cloning of PCR products after defined cohesive termini are created with T4 DNA polymerase.	Stoker AW	1990
The evolutionary conservation of DNA polymerase alpha.	Miller MA, Korn D, Wang TS	1988
A simplified procedure for the analysis of DNA polymerase III levels in Bacillus subtilis strains.	Ciarrocchi G, Fortunato A, Attolini C, Falaschi A	1976
DNA polymerase delta, RFC and PCNA are required for repair synthesis of large looped heteroduplexes in Saccharomyces cerevisiae.	Corrette-Bennett SE, Borgeson C, Sommer D, Burgers PM, Lahue RS	2004
Efficient isothermal expansion of human telomeric and minisatellite repeats by Thermococcus litoralis DNA polymerase.	Hartig JS, Kool ET	2005
Overexpression of human DNA polymerase mu (Pol mu) in a Burkitt's lymphoma cell line affects the somatic hypermutation rate.	Ruiz JF, Lucas D, García-Palomero E, Saez AI, González MA, Piris MA, Bernad A, Blanco L	2004
Deoxy- and dideoxynucleotide discrimination and identification of critical 5' nuclease domain residues of the DNA polymerase I from Mycobacterium tuberculosis.	Mizrahi V, Huberts P	1996
Terminal labeling and addition of homopolymer tracts to duplex DNA fragments by terminal deoxynucleotidyl transferase.	Roychoudhury R, Jay E, Wu R	1976
Partial purification and characterization of two cytoplasmic DNA polymerases from ungerminated wheat.	Castroviejo M, Tarragó-Litvak L, Litvak S	1975
Synthesis and RNA polymerase incorporation of the degenerate ribonucleotide analogue rPTP.	Moriyama K, Negishi K, Briggs MS, Smith CL, Hill F, Churcher MJ, Brown DM, Loakes D	1998
Contribution of DNA polymerase delta to DNA replication in permeable CHO cells synchronized in S phase.	Basnakian A, Banfalvi G, Sarkar N	1989
Specific inhibition of human DNA ligase adenylation by a distamycin derivative possessing antitumor activity.	Montecucco A, Fontana M, Focher F, Lestingi M, Spadari S, Ciarrocchi G	1991
HeLa DNA polymerase alpha activity in vitro: specific stimulation by a non-enzymic protein factor.	Novak B, Baril EF	1978
DNA-polymerase inhibitors. Rifamycin derivatives.	Frolova LY, Meldrays YA, Kochkina LL, Giller SA, Eremeyev AV, Grayevskaya NA, Kisselev LL	1977
Delta-type DNA polymerase characterized from Drosophila melanogaster embryos.	Peck VM, Gerner EW, Cress AE	1992
Fidelity of Thermococcus litoralis DNA polymerase (Vent) in PCR determined by denaturing gradient gel electrophoresis.	Cariello NF, Swenberg JA, Skopek TR	1991
In vitro expansion of mammalian telomere repeats by DNA polymerase alpha-primase.	Nozawa K, Suzuki M, Takemura M, Yoshida S	2000
Fidelity of DNA synthesis by the Thermococcus litoralis DNA polymerase--an extremely heat stable enzyme with proofreading activity.	Mattila P, Korpela J, Tenkanen T, Pitkänen K	1991
Creation of genetic information by DNA polymerase of the thermophilic bacterium Thermus thermophilus.	Ogata N, Miura T	1998
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A host-guest approach for determining drug-DNA interactions: an example using netropsin.	Goodwin KD, Long EC, Georgiadis MM	2005
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A 43 kDa DNA binding protein from the pea chloroplast interacts with and stimulates the cognate DNA polymerase.	Chen W, Gaikwad A, Mukherjee SK, Choudhary NR, Kumar D, Tewari KK	1996
Functional domains in the bacteriophage phi 29 terminal protein for interaction with the phi 29 DNA polymerase and with DNA.	Zaballos A, Salas M	1989
Initiation of phage phi 29 DNA replication by the terminal protein modified at the carboxyl end.	Mellado RP, Salas M	1983
Mammalian DNA polymerase alpha: a replication competent holoenzyme form from calf thymus.	Ottiger H, Frei P, Hässig M, Hübscher U	1987
A kinetic study of rat recombinant DNA polymerase beta: detection of a slow (hysteretic) transition in polymerase activity and inhibition by butylphenyl-deoxyguanosine triphosphate.	DiGiuseppe JA, Wright GE, Dresler SL	1989
The molecular mechanism of inhibition of alpha-type DNA polymerases by N2-(butylphenyl)dGTP and 2-(butylanilino)dATP: variation in susceptibility to polymerization.	Khan NN, Wright GE, Brown NC	1991
Human DNA polymerase mu (Pol mu) exhibits an unusual replication slippage ability at AAF lesion.	Duvauchelle JB, Blanco L, Fuchs RP, Cordonnier AM	2002
Substitution of a residue contacting the triphosphate moiety of the incoming nucleotide increases the fidelity of yeast DNA polymerase zeta.	Howell CA, Kondratick CM, Washington MT	2008
Lagging strand DNA synthesis by calf thymus DNA polymerases alpha, beta, delta and epsilon in the presence of auxiliary proteins.	Podust VN, Hübscher U	1993
Variation of DNA polymerases-alpha, -beta. and -gamma during perinatal tissue growth and differentiation.	Hübscher U, Kuenzle CC, Spadari S	1977
Isolation and identification of the third subunit of mammalian DNA polymerase delta by PCNA-affinity chromatography of mouse FM3A cell extracts.	Hughes P, Tratner I, Ducoux M, Piard K, Baldacci G	1999
Differential functional behavior of viral phi29, Nf and GA-1 SSB proteins.	Gascón I, Lázaro JM, Salas M	2000
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The yeast Saccharomyces cerevisiae DNA polymerase IV: possible involvement in double strand break DNA repair.	Leem SH, Ropp PA, Sugino A	1994
In vitro replication by prokaryotic and eukaryotic polymerases on DNA templates containing site-specific and stereospecific benzo[a]pyrene-7,8-dihydrodiol-9,10-epoxide adducts.	Chary P, Lloyd RS	1995
DNA polymerase beta overexpression stimulates the Rad51-dependent homologous recombination in mammalian cells.	Canitrot Y, Capp JP, Puget N, Bieth A, Lopez BS, Hoffmann JS, Cazaux C	2004
XRCC1-DNA polymerase beta interaction is required for efficient base excision repair.	Dianova II, Sleeth KM, Allinson SL, Parsons JL, Breslin C, Caldecott KW, Dianov GL	2004
Butylphenyl dGTP: a selective and potent inhibitor of mammalian DNA polymerase alpha.	Khan NN, Wright GE, Dudycz LW, Brown NC	1984
The small subunit is required for functional interaction of DNA polymerase delta with the proliferating cell nuclear antigen.	Zhou JQ, He H, Tan CK, Downey KM, So AG	1997
Translesion synthesis by yeast DNA polymerase zeta from templates containing lesions of ultraviolet radiation and acetylaminofluorene.	Guo D, Wu X, Rajpal DK, Taylor JS, Wang Z	2001
Improving dideoxynucleotide-triphosphate utilisation by the hyper-thermophilic DNA polymerase from the archaeon Pyrococcus furiosus.	Evans SJ, Fogg MJ, Mamone A, Davis M, Pearl LH, Connolly BA	2000
2-Hydroxy-dATP is incorporated opposite G by Escherichia coli DNA polymerase III resulting in high mutagenicity.	Kamiya H, Kasai H	2000
Template directed incorporation of nucleotide mixtures using azole-nucleobase analogs.	Hoops GC, Zhang P, Johnson WT, Paul N, Bergstrom DE, Davisson VJ	1997
Highly efficient incorporation of the fluorescent nucleotide analogs tC and tCO by Klenow fragment.	Sandin P, Stengel G, Ljungdahl T, Börjesson K, Macao B, Wilhelmsson LM	2009
Conserved sites in the 5'-3' exonuclease domain of Escherichia coli DNA polymerase.	Gutman PD, Minton KW	1993
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Mechanism of double-base lesion bypass catalyzed by a Y-family DNA polymerase.	Brown JA, Newmister SA, Fiala KA, Suo Z	2008
Novikoff hepatoma deoxyribonucleic acid polymerase. Sensitivity of the beta-polymerase to sulfhydryl blocking agents.	Mosbaugh DW, Kunkel TA, Stalker DM, Tcheng JE, Meyer RR	1976
Human DNA helicase V, a novel DNA unwinding enzyme from HeLa cells.	Tuteja N, Rahman K, Tuteja R, Falaschi A	1993
Uracil recognition by replicative DNA polymerases is limited to the archaea, not occurring with bacteria and eukarya.	Wardle J, Burgers PM, Cann IK, Darley K, Heslop P, Johansson E, Lin LJ, McGlynn P, Sanvoisin J, Stith CM, Connolly BA	2008
The Trypanosoma brucei DNA polymerase alpha core subunit gene is developmentally regulated and linked to a constitutively expressed open reading frame.	Leegwater PA, Strating M, Murphy NB, Kooy RF, van der Vliet PC, Overdulve JP	1991
Editing of misaligned 3'-termini by an intrinsic 3'-5' exonuclease activity residing in the PHP domain of a family X DNA polymerase.	Baños B, Lázaro JM, Villar L, Salas M, de Vega M	2008
Selective amplification of RNA utilizing the nucleotide analog dITP and Thermus thermophilus DNA polymerase.	Auer T, Sninsky JJ, Gelfand DH, Myers TW	1996
The DNA polymerase genes of several HMU-bacteriophages have similar group I introns with highly divergent open reading frames.	Goodrich-Blair H, Shub DA	1994
Re-engineering the polymerase domain of Klenow fragment and evaluation of overproduction and purification strategies.	Derbyshire V, Astatke M, Joyce CM	1993
Determinants of nucleotide sugar recognition in an archaeon DNA polymerase.	Gardner AF, Jack WE	1999
Effect of manganese on in vitro replication of damaged DNA catalyzed by the herpes simplex virus type-1 DNA polymerase.	Villani G, Tanguy Le Gac N, Wasungu L, Burnouf DY, Fuchs RP, Boehmer PE	2002
Characterization of a replicative DNA polymerase mutant with reduced fidelity and increased translesion synthesis capacity.	Zhong X, Pedersen LC, Kunkel TA	2008
Characterization of a 3'----5' exonuclease activity in the phage phi 29-encoded DNA polymerase.	Blanco L, Salas M	1985
Structural and functional analysis of temperature-sensitive mutants of the phage phi 29 DNA polymerase.	Blasco MA, Blanco L, Parés E, Salas M, Bernad A	1990
On the fidelity of DNA replication: herpes DNA polymerase and its associated exonuclease.	Abbotts J, Nishiyama Y, Yoshida S, Loeb LA	1987
8-Hydroxyadenine (7,8-dihydro-8-oxoadenine) induces misincorporation in in vitro DNA synthesis and mutations in NIH 3T3 cells.	Kamiya H, Miura H, Murata-Kamiya N, Ishikawa H, Sakaguchi T, Inoue H, Sasaki T, Masutani C, Hanaoka F, Nishimura S	1995
Development of novel inhibitor probes of DNA polymerase III based on dGTP analogs of the HPUra type: base, nucleoside and nucleotide derivatives of N2-(3,4-dichlorobenzyl)guanine.	Butler MM, Dudycz LW, Khan NN, Wright GE, Brown NC	1990
Promiscuous mismatch extension by human DNA polymerase lambda.	Picher AJ, García-Díaz M, Bebenek K, Pedersen LC, Kunkel TA, Blanco L	2006
Strong positional preference in the interaction of LNA oligonucleotides with DNA polymerase and proofreading exonuclease activities: implications for genotyping assays.	Di Giusto DA, King GC	2004
DNA polymerase alpha is associated with replicating SV40 nucleoprotein complexes.	Otto B, Fanning E	1978
The use of large-fragment DNA polymerase I improves the DNAse dependence of the in situ nick-translation procedure.	de Graaf A, van Hemert FJ	1988
Characterization of a stable, major DNA polymerase alpha species devoid of DNA primase activity.	Kaiserman HB, Benbow RM	1987
Mice expressing an error-prone DNA polymerase in mitochondria display elevated replication pausing and chromosomal breakage at fragile sites of mitochondrial DNA.	Bailey LJ, Cluett TJ, Reyes A, Prolla TA, Poulton J, Leeuwenburgh C, Holt IJ	2009
Sequence dependence for bypass of thymine glycols in DNA by DNA polymerase I.	Hayes RC, LeClerc JE	1986
PCNA monoubiquitylation and DNA polymerase eta ubiquitin-binding domain are required to prevent 8-oxoguanine-induced mutagenesis in Saccharomyces cerevisiae.	van der Kemp PA, de Padula M, Burguiere-Slezak G, Ulrich HD, Boiteux S	2009
Crystal engineering of HIV-1 reverse transcriptase for structure-based drug design.	Bauman JD, Das K, Ho WC, Baweja M, Himmel DM, Clark AD, Oren DA, Boyer PL, Hughes SH, Shatkin AJ, Arnold E	2008
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Subunit interactions in the assembly of Saccharomyces cerevisiae DNA polymerase alpha.	Biswas SB, Khopde SM, Zhu Fx F, Biswas EE	2003
Mutant Thermotoga neapolitana DNA polymerase I: altered catalytic properties for non-templated nucleotide addition and incorporation of correct nucleotides.	Yang SW, Astatke M, Potter J, Chatterjee DK	2002
DNA polymerase beta is required for efficient DNA strand break repair induced by methyl methanesulfonate but not by hydrogen peroxide.	Fortini P, Pascucci B, Belisario F, Dogliotti E	2000
Proteolysis of the human DNA polymerase epsilon catalytic subunit by caspase-3 and calpain specifically during apoptosis.	Liu W, Linn S	2000
Domain specific interaction in the XRCC1-DNA polymerase beta complex.	Marintchev A, Robertson A, Dimitriadis EK, Prasad R, Wilson SH, Mullen GP	2000
Isolation and characterisation of the cDNA encoding a glycosylated accessory protein of pea chloroplast DNA polymerase.	Gaikwad A, Tewari KK, Kumar D, Chen W, Mukherjee SK	1999
Non-homologous recombination mediated by Thermus aquaticus DNA polymerase I. Evidence supporting a copy choice mechanism.	Zaphiropoulos PG	1998
Synthesis and evaluation of oligodeoxyribonucleotides containing an aryl(trifluoromethyl)diazirine moiety as the cross-linking probe: photoaffinity labeling of mammalian DNA polymerase beta.	Yamaguchi T, Suyama K, Narita K, Kohgo S, Tomikawa A, Saneyoshi M	1997
Organization and nucleotide sequence of the DNA polymerase gene from the archaeon Pyrococcus furiosus.	Uemori T, Ishino Y, Toh H, Asada K, Kato I	1993
Cloning DPB3, the gene encoding the third subunit of DNA polymerase II of Saccharomyces cerevisiae.	Araki H, Hamatake RK, Morrison A, Johnson AL, Johnston LH, Sugino A	1991
Aphidicolin resistance in herpes simplex virus type I reveals features of the DNA polymerase dNTP binding site.	Hall JD, Wang YS, Pierpont J, Berlin MS, Rundlett SE, Woodward S	1989
A trimeric DNA polymerase complex increases the native replication processivity.	Mikheikin AL, Lin HK, Mehta P, Jen-Jacobson L, Trakselis MA	2009
Characterization of 3'----5' exonuclease associated with DNA polymerase of silkworm nuclear polyhedrosis virus.	Mikhailov VS, Marlyev KA, Ataeva JO, Kullyev PK, Atrazhev AM	1986
Characterization of the DNA polymerase requirement of human base excision repair.	Nealon K, Nicholl ID, Kenny MK	1996
Tolerance for 8-oxoguanine but not thymine glycol in alignment-based gap filling of partially complementary double-strand break ends by DNA polymerase lambda in human nuclear extracts.	Zhou RZ, Blanco L, Garcia-Diaz M, Bebenek K, Kunkel TA, Povirk LF	2008
DNA polymerase III chi subunit ties single-stranded DNA binding protein to the bacterial replication machinery.	Witte G, Urbanke C, Curth U	2003
DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history.	Aravind L, Koonin EV	1999
Fission yeast with DNA polymerase delta temperature-sensitive alleles exhibits cell division cycle phenotype.	Francesconi S, Park H, Wang TS	1993
An autoradiographic demonstration of nuclear DNA replication by DNA polymerase alpha and of mitochondrial DNA synthesis by DNA polymerase gamma.	Geuskens M, Hardt N, Pedrali-Noy G, Spadari S	1981
Characterization of DNA synthesis catalyzed by bacteriophage T4 replication complexes reconstituted on synthetic circular substrates.	Kadyrov FA, Drake JW	2002
Characteristic alteration in the nuclear DNA polymerase activity during the cell division cycle of Saccharomyces cerevisiae.	Tsuchiya E, Kimura K, Miyakawa T, Fukui S	1984
Plasmid-based lacZalpha assay for DNA polymerase fidelity: application to archaeal family-B DNA polymerase.	Jozwiakowski SK, Connolly BA	2009
XRCC1 polypeptide interacts with DNA polymerase beta and possibly poly (ADP-ribose) polymerase, and DNA ligase III is a novel molecular 'nick-sensor' in vitro.	Caldecott KW, Aoufouchi S, Johnson P, Shall S	1996
Identification of a DNA polymerase beta-like form in Drosophila melanogaster adult flies.	Furia M, Polito LC, Locorotondo G, Grippo P	1979
Stopping the DNA polymerase activity at a specific site with a dideoxyoligonucleotide: selective labelling of single stranded circular DNA.	Mattanovich D, Himmler G, Regner F, Laimer M, Steinkellner H, Rüker F, Katinger H	1989
PCNA-induced DNA synthesis past cis-syn and trans-syn-I thymine dimers by calf thymus DNA polymerase delta in vitro.	O'Day CL, Burgers PM, Taylor JS	1992
Isolation of the catalytic core of DNA polymerase alpha from rabbit bone marrow.	Goscin LP, Byrnes JJ	1982
Sites of termination of in vitro DNA synthesis on cis-diamminedichloroplatinum(II) treated single-stranded DNA: a comparison between E. coli DNA polymerase I and eucaryotic DNA polymerases alpha.	Villani G, Hübscher U, Butour JL	1988
Characterization of a Mr = 56,000 polypeptide associated with 10S DNA polymerase alpha purified from calf thymus using monoclonal antibody.	Masaki S, Tamai K, Suzuki R, Tanabe K, Takahashi T, Yoshida S	1985
Response of human DNA polymerase iota to DNA lesions.	Zhang Y, Yuan F, Wu X, Taylor JS, Wang Z	2001
A highly conserved Tyrosine residue of family B DNA polymerases contributes to dictate translesion synthesis past 8-oxo-7,8-dihydro-2'-deoxyguanosine.	de Vega M, Salas M	2007
Dihydrothymidine and thymidine glycol triphosphates as substrates for DNA polymerases: differential recognition of thymine C5-C6 bond saturation and sequence specificity of incorporation.	Ide H, Wallace SS	1988
The human Rad9/Rad1/Hus1 damage sensor clamp interacts with DNA polymerase beta and increases its DNA substrate utilisation efficiency: implications for DNA repair.	Toueille M, El-Andaloussi N, Frouin I, Freire R, Funk D, Shevelev IV, Friedrich-Heineken E, Villani G, Hottiger MO, Hübscher U	2004
Nucleotide incorporation by human DNA polymerase gamma opposite benzo[a]pyrene and benzo[c]phenanthrene diol epoxide adducts of deoxyguanosine and deoxyadenosine.	Graziewicz MA, Sayer JM, Jerina DM, Copeland WC	2004
The human checkpoint Rad protein Rad17 is chromatin-associated throughout the cell cycle, localizes to DNA replication sites, and interacts with DNA polymerase epsilon.	Post SM, Tomkinson AE, Lee EY	2003
Exploration of factors driving incorporation of unnatural dNTPS into DNA by Klenow fragment (DNA polymerase I) and DNA polymerase alpha.	Kincaid K, Beckman JW, Zivkovic A, Halcomb RL, Engels JW, Kuchta RD	2005
Examining the ribonuclease H primer grip of HIV-1 reverse transcriptase by charge neutralization of RNA/DNA hybrids.	Dash C, Scarth BJ, Badorrek C, Götte M, Le Grice SF	2008
DNA polymerase proofreading: active site switching catalyzed by the bacteriophage T4 DNA polymerase.	Fidalgo da Silva E, Reha-Krantz LJ	2007
The unstructured C-terminus of the tau subunit of Escherichia coli DNA polymerase III holoenzyme is the site of interaction with the alpha subunit.	Jergic S, Ozawa K, Williams NK, Su XC, Scott DD, Hamdan SM, Crowther JA, Otting G, Dixon NE	2007
Influence of template inactivators on the binding of DNA polymerase to DNA.	Müller WE, Obermeier J, Totsuka A, Zahn RK	1974
The active site residue Valine 867 in human telomerase reverse transcriptase influences nucleotide incorporation and fidelity.	Drosopoulos WC, Prasad VR	2007
DNA polymerase alpha from the nuclear matrix of cells infected with simian virus 40.	Jones C, Su RT	1982
Partial reconstitution of DNA large loop repair with purified proteins from Saccharomyces cerevisiae.	Sommer D, Stith CM, Burgers PM, Lahue RS	2008
Differences in replication of a DNA template containing an ethyl phosphotriester by T4 DNA polymerase and Escherichia coli DNA polymerase I.	Tsujikawa L, Weinfield M, Reha-Krantz LJ	2003
Functional characterization of highly processive protein-primed DNA polymerases from phages Nf and GA-1, endowed with a potent strand displacement capacity.	Longás E, de Vega M, Lázaro JM, Salas M	2006
The Leu22Pro tumor-associated variant of DNA polymerase beta is dRP lyase deficient.	Dalal S, Chikova AK, Jaeger J, Sweasy JB	2008
A dynamic model for replication protein A (RPA) function in DNA processing pathways.	Fanning E, Klimovich V, Nager AR	2006
Error-free bypass of 2-hydroxyadenine by human DNA polymerase lambda with Proliferating Cell Nuclear Antigen and Replication Protein A in different sequence contexts.	Crespan E, Hübscher U, Maga G	2007
Factor D is a selective single-stranded oligodeoxythymidine binding protein.	Fry M, Perrino FW, Levy A, Loeb LA	1988
Broad-spectrum aptamer inhibitors of HIV reverse transcriptase closely mimic natural substrates.	Ditzler MA, Bose D, Shkriabai N, Marchand B, Sarafianos SG, Kvaratskhelia M, Burke DH	2011
Compilation and alignment of DNA polymerase sequences.	Ito J, Braithwaite DK	1991
The accessory subunit B of DNA polymerase gamma is required for mitochondrial replisome function.	Farge G, Pham XH, Holmlund T, Khorostov I, Falkenberg M	2007
A mass spectrometry-based approach for identifying novel DNA polymerase substrates from a pool of dNTP analogues.	Kincaid K, Kuchta RD	2006
The fidelity of base selection by the polymerase subunit of DNA polymerase III holoenzyme.	Sloane DL, Goodman MF, Echols H	1988
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A DNA polymerase activity is associated with Cauliflower Mosaic Virus.	Menissier J, Laquel P, Lebeurier G, Hirth L	1984
Synthesis of novel poly(dG)-poly(dG)-poly(dC) triplex structure by Klenow exo- fragment of DNA polymerase I.	Kotlyar AB, Borovok N, Molotsky T, Klinov D, Dwir B, Kapon E	2005
The elongation of mismatched primers by DNA polymerase alpha from calf thymus.	Reckmann B, Grosse F, Krauss G	1983
T4 DNA polymerase (3'-5') exonuclease, an enzyme for the detection and quantitation of stable DNA lesions: the ultraviolet light example.	Doetsch PW, Chan GL, Haseltine WA	1985
Fidelity of DNA synthesis catalyzed by human DNA polymerase alpha and HIV-1 reverse transcriptase: effect of reaction pH.	Eckert KA, Kunkel TA	1993
The influence of 3TC-resistance mutations E89G and M184V in the human immunodeficiency virus reverse transcriptase on mispair extension efficiency.	Hamburgh ME, Drosopoulos WC, Prasad VR	1998
Human DNA polymerase alpha catalytic polypeptide binds ConA and RCA and contains a specific labile site in the N-terminus.	Hsi KL, Copeland WC, Wang TS	1990
Biochemical, inhibition and inhibitor resistance studies of xenotropic murine leukemia virus-related virus reverse transcriptase.	Ndongwe TP, Adedeji AO, Michailidis E, Ong YT, Hachiya A, Marchand B, Ryan EM, Rai DK, Kirby KA, Whatley AS, Burke DH, Johnson M, Ding S, Zheng YM, Liu SL, Kodama EI, Delviks-Frankenberry KA, Pathak VK, Mitsuya H, Parniak MA, Singh K, Sarafianos SG	2011
The solution structure of the amino-terminal domain of human DNA polymerase epsilon subunit B is homologous to C-domains of AAA+ proteins.	Nuutinen T, Tossavainen H, Fredriksson K, Pirilä P, Permi P, Pospiech H, Syvaoja JE	2008
Mechanism of ultraviolet-induced mutagenesis: the coding properties of ultraviolet-irradiated poly(dC) replicated by E. coli DNA polymerase I.	Lecomte P, Boiteux S, Doubleday O	1981
Purification and partial characterization of a DNA polymerase alpha species from calf thymus.	Grosse F, Krauss G	1980
The mode of inhibitory action by pyridoxal 5-phosphate on DNA polymerase-alpha and -beta.	Oguro M, Nagano H, Mano Y	1979
Template-dependent variation in the relative fidelity of DNA polymerase I of Escherichia coli in the presence of Mg2+ versus Mn2+.	Hillebrand GG, Beattie KL	1984
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A mutation in the primer grip region of HIV-1 reverse transcriptase that confers reduced fidelity of DNA synthesis.	Gutiérrez-Rivas M, Menéndez-Arias L	2001
Determination of human DNA polymerase utilization for the repair of a model ionizing radiation-induced DNA strand break lesion in a defined vector substrate.	Winters TA, Russell PS, Kohli M, Dar ME, Neumann RD, Jorgensen TJ	1999
Dye structure affects Taq DNA polymerase terminator selectivity.	Brandis JW	1999
Taq DNA polymerase blockage at pyrimidine dimers.	Wellinger RE, Thoma F	1996
Primary structural comparison of RNA-dependent polymerases from plant, animal and bacterial viruses.	Kamer G, Argos P	1984
'Footprinting' proteins on DNA with peroxonitrous acid.	King PA, Jamison E, Strahs D, Anderson VE, Brenowitz M	1993
Protection of avian myeloblastosis virus (AMV) DNA polymerase by substrates against heat inactivation.	Papas TS, Chirigos MA, Chirikjian JG	1974
Deoxyribonucleic acid of Cancer pagurus. II. Template activity for a DNA-dependent DNA polymerase of eukaryotic cells.	de Recondo AM, Londos-Gagliardi D, Aubel-Sadron G	1974
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Lack of sugar discrimination by human Pol mu requires a single glycine residue.	Ruiz JF, Juárez R, García-Díaz M, Terrados G, Picher AJ, González-Barrera S, Fernández de Henestrosa AR, Blanco L	2003
Involvement of phage phi29 DNA polymerase and terminal protein subdomains in conferring specificity during initiation of protein-primed DNA replication.	Pérez-Arnaiz P, Longás E, Villar L, Lázaro JM, Salas M, de Vega M	2007
Specific binding of the adenovirus terminal protein precursor-DNA polymerase complex to the origin of DNA replication.	Rijnders AW, van Bergen BG, van der Vliet PC, Sussenbach JS	1983
A novel DNA polymerase induced by Bacillus subtilis phage phi 29.	Watabe K, Ito J	1983
DNA polymerase and simian virus 40 infection of resting monkey cells: induction of aphidicolin resistant alpha-polymerase.	Tanabe K, Karawya E, Fewell JW, Kuff EL, Wilson SH	1983
Expression of adenovirus type 2 DNA polymerase in insect cells infected with a recombinant baculovirus.	Watson CJ, Hay RT	1990
Protein sequences conserved in prokaryotic aminoacyl-tRNA synthetases are important for the activity of the processivity factor of human mitochondrial DNA polymerase.	Carrodeguas JA, Bogenhagen DF	2000
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Influence of local sequence context on damaged base conformation in human DNA polymerase iota: molecular dynamics studies of nucleotide incorporation opposite a benzo[a]pyrene-derived adenine lesion.	Donny-Clark K, Broyde S	2009
Complementation of defective translesion synthesis and UV light sensitivity in xeroderma pigmentosum variant cells by human and mouse DNA polymerase eta.	Yamada A, Masutani C, Iwai S, Hanaoka F	2000
Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro.	Zhang Y, Yuan F, Wu X, Wang M, Rechkoblit O, Taylor JS, Geacintov NE, Wang Z	2000
RNA determinants of translational operator recognition by the DNA polymerases of bacteriophages T4 and RB69.	Petrov VM, Karam JD	2002
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Comparison of the A-T rich regions and the Bacillus subtilis RNA polymerase binding sites in phage phi 29 DNA.	Sogo JM, Rodeño P, Koller T, Viñuela E, Salas M	1979
The human REV1 gene codes for a DNA template-dependent dCMP transferase.	Lin W, Xin H, Zhang Y, Wu X, Yuan F, Wang Z	1999
Selective inactivation of the 3' to 5' exonuclease activity of Escherichia coli DNA polymerase I by heat.	Lecomte PJ, Doubleday OP	1983
Measurement of the sequence specificity of covalent DNA modification by antineoplastic agents using Taq DNA polymerase.	Ponti M, Forrow SM, Souhami RL, D'Incalci M, Hartley JA	1991
Studies on the inhibition of highly purified calf thymus 8S and 7.3S DNA polymerase alpha by aphidicolin.	Holmes AM	1981
Enzymatic activities of overexpressed herpes simplex virus DNA polymerase purified from recombinant baculovirus-infected insect cells.	Marcy AI, Olivo PD, Challberg MD, Coen DM	1990
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DNA replication and UV-induced DNA repair synthesis in human fibroblasts are much less sensitive than DNA polymerase alpha to inhibition by butylphenyl-deoxyguanosine triphosphate.	Dresler SL, Frattini MG	1986
Specific interaction between DNA polymerase II (PolD) and RadB, a Rad51/Dmc1 homolog, in Pyrococcus furiosus.	Hayashi I, Morikawa K, Ishino Y	1999
Novel thermostable Y-family polymerases: applications for the PCR amplification of damaged or ancient DNAs.	McDonald JP, Hall A, Gasparutto D, Cadet J, Ballantyne J, Woodgate R	2006
Characterization of the 5' to 3' exonuclease associated with Thermus aquaticus DNA polymerase.	Longley MJ, Bennett SE, Mosbaugh DW	1990
Antibody to B. subtilis DNA polymerase III: use in enzyme purification and examination of homology among replication-specific DNA polymerases.	Barnes MH, Brown NC	1979
Replication of phage phi 29 DNA in vitro: role of the viral protein p6 in initiation and elongation.	Blanco L, Gutiérrez J, Lázaro JM, Bernad A, Salas M	1986
The eukaryotic leading and lagging strand DNA polymerases are loaded onto primer-ends via separate mechanisms but have comparable processivity in the presence of PCNA.	Chilkova O, Stenlund P, Isoz I, Stith CM, Grabowski P, Lundström EB, Burgers PM, Johansson E	2007
Location of the serine residue involved in the linkage between the terminal protein and the DNA of phage phi 29.	Hermoso JM, Méndez E, Soriano F, Salas M	1985
Poleta, Polzeta and Rev1 together are required for G to T transversion mutations induced by the (+)- and (-)-trans-anti-BPDE-N2-dG DNA adducts in yeast cells.	Zhao B, Wang J, Geacintov NE, Wang Z	2006
Structure-activity relationships for the inhibition of DNA polymerase alpha by aphidicolin derivatives.	Prasad G, Edelson RA, Gorycki PD, Macdonald TL	1989
Bacillus subtilis tau subunit of DNA polymerase III interacts with bacteriophage SPP1 replicative DNA helicase G40P.	Martínez-Jiménez MI, Mesa P, Alonso JC	2002
Ribozyme-mediated REV1 inhibition reduces the frequency of UV-induced mutations in the human HPRT gene.	Clark DR, Zacharias W, Panaitescu L, McGregor WG	2003
Characterization of SpPol4, a unique X-family DNA polymerase in Schizosaccharomyces pombe.	González-Barrera S, Sánchez A, Ruiz JF, Juárez R, Picher AJ, Terrados G, Andrade P, Blanco L	2005
The DNA polymerase from the archaebacterium Pyrococcus furiosus does not testify for a specific relationship between archaebacteria and eukaryotes.	Forterre P	1992
Molecular cloning of the cDNA for the catalytic subunit of human DNA polymerase delta.	Yang CL, Chang LS, Zhang P, Hao H, Zhu L, Toomey NL, Lee MY	1992
Multiple primer extension by DNA polymerase on a novel plastic DNA array coated with a biocompatible polymer.	Kinoshita K, Fujimoto K, Yakabe T, Saito S, Hamaguchi Y, Kikuchi T, Nonaka K, Murata S, Masuda D, Takada W, Funaoka S, Arai S, Nakanishi H, Yokoyama K, Fujiwara K, Matsubara K	2007
Random mutagenesis of gene-sized DNA molecules by use of PCR with Taq DNA polymerase.	Zhou YH, Zhang XP, Ebright RH	1991
Uracil in deoxyribonucleotide polymers reduces their template-primer activity for E. coli DNA polymerase I.	Vilpo JA, Ridell J	1983
Mutagenic nucleotide incorporation and hindered translocation by a food carcinogen C8-dG adduct in Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): modeling and dynamics studies.	Zhang L, Rechkoblit O, Wang L, Patel DJ, Shapiro R, Broyde S	2006
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Labelling DNA ends with the Klenow fragment of the E. coli DNA polymerase I: a cautionary note.	del Solar G, Espinosa M	1991
DNA polymerase alpha, beta and gamma activities in ultraviolet irradiated CV-1 monkey cells.	Wicker R, Scovassi AI, Nocentini S	1979
Nucleotide sequence of the Borrelia burgdorferi dnaN gene encoding the beta subunit of DNA polymerase III.	Old IG, Margarita D, Saint Girons I	1993
In vitro synthesis of uniform poly(dG)-poly(dC) by Klenow exo- fragment of polymerase I.	Kotlyar AB, Borovok N, Molotsky T, Fadeev L, Gozin M	2005
Differential effects of dimethylsulfoxide on the activities of human DNA polymerases alpha and delta.	Lee MY, Toomey NL	1986
Large polypeptides of 10S DNA polymerase alpha from calf thymus: rapid isolation using monoclonal antibody and tryptic peptide mapping analysis.	Masaki S, Tanabe K, Yoshida S	1984
A survey of splice variants of the human hypoxanthine phosphoribosyl transferase and DNA polymerase beta genes: products of alternative or aberrant splicing?	Skandalis A, Uribe E	2004
Minimizing deletion mutagenesis artifact during Taq DNA polymerase PCR by E. coli SSB.	Chou Q	1992
The use of native T7 DNA polymerase for site-directed mutagenesis.	Bebenek K, Kunkel TA	1989
Structural homology among calf thymus alpha-polymerase polypeptides.	Albert W, Grummt F, Hübscher U, Wilson SH	1982
DNA polymerase alpha and beta in the California urchin.	Racine FM, Morris PW	1978
Mechanism of 3' to 5' exonuclease associated with phage T5-induced DNA polymerase: processiveness and template specificity.	Das SK, Fujimura RK	1980
Early effects of phytohemagglutinin on induction of DNA polymerase, thymidine kinase, deoxyribonucleoside triphosphate pools and DNA synthesis in human lymphocytes.	Tyrsted G, Munch-Petersen B	1977
Physical and functional interactions of the tumor suppressor protein p53 and DNA polymerase alpha-primase.	Melle C, Nasheuer HP	2002
Specific inhibition of DNA polymerase beta by its 14 kDa domain: role of single- and double-stranded DNA binding and 5'-phosphate recognition.	Husain I, Morton BS, Beard WA, Singhal RK, Prasad R, Wilson SH, Besterman JM	1995
Regulation of DNA metabolic enzymes upon induction of preB cell development and V(D)J recombination: up-regulation of DNA polymerase delta.	Jessberger R, Schär P, Robins P, Ferrari E, Riwar B, Hübscher U	1997
Action of pancreatic DNase: requirements for activation of DNA as a template-primer for DNA polymerase.	Baril E, Mitchener J, Lee L, Baril B	1977
Isolation, sequencing and overexpression of the gene encoding the theta subunit of DNA polymerase III holoenzyme.	Carter JR, Franden MA, Aebersold R, Kim DR, McHenry CS	1993
Aphidicolin inhibits DNA synthesis by DNA polymerase alpha and isolated nuclei by a similar mechanism.	Krokan H, Wist E, Krokan RH	1981
Does butylphenyl-deoxyguanosine triphosphate differentially inhibit DNA polymerase alpha and delta activities in permeabilized HeLa cells?	Jackson DA	1990
Elucidation of the mechanism of selective inhibition of mammalian DNA polymerase alpha by 2-butylanilinopurines: development and characterization of 2-(p-n-butylanilino)adenine and its deoxyribonucleotides.	Khan NN, Wright GE, Dudycz LW, Brown NC	1985
Nuclear DNA polymerase beta from Leishmania infantum. Cloning, molecular analysis and developmental regulation.	Taladriz S, Hanke T, Ramiro MJ, García-Díaz M, García De Lacoba M, Blanco L, Larraga V	2001
DNA polymerase delta-dependent repair of DNA single strand breaks containing 3'-end proximal lesions.	Parsons JL, Preston BD, O'Connor TR, Dianov GL	2007
Phosphorylation of human DNA polymerase lambda by the cyclin-dependent kinase Cdk2/cyclin A complex is modulated by its association with proliferating cell nuclear antigen.	Frouin I, Toueille M, Ferrari E, Shevelev IV, Hübscher U	2005
(E)-5-(2-bromovinyl)-2'-deoxyuridine-5'-triphosphate as a DNA polymerase substrate.	Sági J, Szabolcs A, Szemzö A, Otvös L	1981
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DNA polymerase kappa produces interrupted mutations and displays polar pausing within mononucleotide microsatellite sequences.	Hile SE, Eckert KA	2008
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An error-prone family Y DNA polymerase (DinB homolog from Sulfolobus solfataricus) uses a 'steric gate' residue for discrimination against ribonucleotides.	DeLucia AM, Grindley ND, Joyce CM	2003
Stimulation of human DNA polymerase epsilon by MDM2.	Asahara H, Li Y, Fuss J, Haines DS, Vlatkovic N, Boyd MT, Linn S	2003
A 21-amino acid peptide from the cysteine cluster II of the family D DNA polymerase from Pyrococcus horikoshii stimulates its nuclease activity which is Mre11-like and prefers manganese ion as the cofactor.	Shen Y, Tang XF, Yokoyama H, Matsui E, Matsui I	2004
The mitochondrial DNA polymerase as a target of oxidative damage.	Graziewicz MA, Day BJ, Copeland WC	2002
The role of DNA polymerase activity in human non-homologous end joining.	Pospiech H, Rytkönen AK, Syväoja JE	2001
Arg660Ser mutation in Thermus aquaticus DNA polymerase I suppresses T-->C transitions: implication of wobble base pair formation at the nucleotide incorporation step.	Yoshida K, Tosaka A, Kamiya H, Murate T, Kasai H, Nimura Y, Ogawa M, Yoshida S, Suzuki M	2001
Cloning and characterization of the 5'-upstream sequence governing the cell cycle-dependent transcription of mouse DNA polymerase alpha 68 kDa subunit gene.	Nishikawa NS, Izumi M, Uchida H, Yokoi M, Miyazawa H, Hanaoka F	2000
Inhibition of DNA polymerase reactions by pyrimidine nucleotide analogues lacking the 2-keto group.	Guo MJ, Hildbrand S, Leumann CJ, McLaughlin LW, Waring MJ	1998
Substrate and mispairing properties of 5-formyl-2'-deoxyuridine 5'-triphosphate assessed by in vitro DNA polymerase reactions.	Yoshida M, Makino K, Morita H, Terato H, Ohyama Y, Ide H	1997
Distinct roles of E2F recognition sites as positive or negative elements in regulation of the DNA polymerase alpha 180 kDa catalytic subunit gene promoter during Drosophila development.	Yamaguchi M, Hayashi Y, Hirose F, Nishimoto Y, Matsukage A	1997
Mitochondrial DNA polymerase gamma is expressed and translated in the absence of mitochondrial DNA maintenance and replication.	Davis AF, Ropp PA, Clayton DA, Copeland WC	1996
The gamma subfamily of DNA polymerases: cloning of a developmentally regulated cDNA encoding Xenopus laevis mitochondrial DNA polymerase gamma.	Ye F, Carrodeguas JA, Bogenhagen DF	1996
On the mechanism of preferential incorporation of dAMP at abasic sites in translesional DNA synthesis. Role of proofreading activity of DNA polymerase and thermodynamic characterization of model template-primers containing an abasic site.	Ide H, Murayama H, Sakamoto S, Makino K, Honda K, Nakamuta H, Sasaki M, Sugimoto N	1995
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DNA strand transfer catalyzed by the 5'-3' exonuclease domain of Escherichia coli DNA polymerase I.	Zhang W, Evans DH	1995
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Overproduction and purification of protein P6 of Bacillus subtilis phage phi 29: role in the initiation of DNA replication.	Pastrana R, Lázaro JM, Blanco L, García JA, Méndez E, Salas M	1985
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DNA damage alters DNA polymerase delta to a form that exhibits increased discrimination against modified template bases and mismatched primers.	Meng X, Zhou Y, Zhang S, Lee EY, Frick DN, Lee MY	2009
Metal-induced DNA translocation leads to DNA polymerase conformational activation.	Kirby TW, DeRose EF, Cavanaugh NA, Beard WA, Shock DD, Mueller GA, Wilson SH, London RE	2011
Low-fidelity Pyrococcus furiosus DNA polymerase mutants useful in error-prone PCR.	Biles BD, Connolly BA	2004
A novel mechanism of selectivity against AZT by the human mitochondrial DNA polymerase.	Hanes JW, Johnson KA	2007
The herpes simplex virus type 1 DNA polymerase processivity factor, UL42, does not alter the catalytic activity of the UL9 origin-binding protein but facilitates its loading onto DNA.	Trego KS, Zhu Y, Parris DS	2005
Characterization of DNA polymerase X from Thermus thermophilus HB8 reveals the POLXc and PHP domains are both required for 3'-5' exonuclease activity.	Nakane S, Nakagawa N, Kuramitsu S, Masui R	2009
Unnatural imidazopyridopyrimidine:naphthyridine base pairs: selective incorporation and extension reaction by Deep Vent (exo- ) DNA polymerase.	Ogata S, Takahashi M, Minakawa N, Matsuda A	2009
Duplex strand joining reactions catalyzed by vaccinia virus DNA polymerase.	Hamilton MD, Nuara AA, Gammon DB, Buller RM, Evans DH	2007
Enzymatic processing of replication and recombination intermediates by the vaccinia virus DNA polymerase.	Hamilton MD, Evans DH	2005
Biochemical behavior of N-oxidized cytosine and adenine bases in DNA polymerase-mediated primer extension reactions.	Tsunoda H, Kudo T, Masaki Y, Ohkubo A, Seio K, Sekine M	2011
A novel regulatory circuit in base excision repair involving AP endonuclease 1, Creb1 and DNA polymerase beta.	Pei DS, Yang XJ, Liu W, Guikema JE, Schrader CE, Strauss PR	2011
Engineered split in Pfu DNA polymerase fingers domain improves incorporation of nucleotide gamma-phosphate derivative.	Hansen CJ, Wu L, Fox JD, Arezi B, Hogrefe HH	2011
PCR amplification of DNA containing non-standard base pairs by variants of reverse transcriptase from Human Immunodeficiency Virus-1.	Sismour AM, Lutz S, Park JH, Lutz MJ, Boyer PL, Hughes SH, Benner SA	2004
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Cloning of the gene for the 73 kD subunit of the DNA polymerase alpha primase of Drosophila melanogaster.	Cotterill S, Lehman IR, McLachlan P	1992
Involvement of residues of the 29 terminal protein intermediate and priming domains in the formation of a stable and functional heterodimer with the replicative DNA polymerase.	Del Prado A, Villar L, de Vega M, Salas M	2011
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The 'helix clamp' in HIV-1 reverse transcriptase: a new nucleic acid binding motif common in nucleic acid polymerases.	Hermann T, Meier T, Götte M, Heumann H	1994
Roles of DNA polymerase I in leading and lagging-strand replication defined by a high-resolution mutation footprint of ColE1 plasmid replication.	Allen JM, Simcha DM, Ericson NG, Alexander DL, Marquette JT, Van Biber BP, Troll CJ, Karchin R, Bielas JH, Loeb LA, Camps M	2011
Twinkle and POLG defects enhance age-dependent accumulation of mutations in the control region of mtDNA.	Wanrooij S, Luoma P, Van Goethem G, Van Broeckhoven C, Suomalainen A, Spelbrink JN	2004
Human immunodeficiency virus type-1 reverse transcription can be inhibited in vitro by oligonucleotides that target both natural and synthetic tRNA primers.	Wei X, Götte M, Wainberg MA	2000
Clustering of Alpers disease mutations and catalytic defects in biochemical variants reveal new features of molecular mechanism of the human mitochondrial replicase, Pol {gamma}	Euro L, Farnum GA, Palin EJ, Suomalainen A, Kaguni LS	2011
Differential inhibition of human placental DNA polymerases delta and alpha by BuPdGTP and BuAdATP.	Lee MY, Toomey NL, Wright GE	1985
Critical amino acids in Escherichia coli UmuC responsible for sugar discrimination and base-substitution fidelity.	Vaisman A, Kuban W, McDonald JP, Karata K, Yang WW, Goodman MF, Woodgate R	2012
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Biochemical properties and base excision repair complex formation of apurinic/apyrimidinic endonuclease from Pyrococcus furiosus.	Kiyonari S, Tahara S, Shirai T, Iwai S, Ishino S, Ishino Y	2009
A novel DNA nuclease is stimulated by association with the GINS complex.	Li Z, Pan M, Santangelo TJ, Chemnitz W, Yuan W, Edwards JL, Hurwitz J, Reeve JN, Kelman Z	2011
Assembly, purification and crystallization of an active HIV-1 reverse transcriptase initiation complex.	Pata JD, King BR, Steitz TA	2002
Cyclobutane thymine dimers in a ras proto-oncogene hot spot activate the gene by point mutation.	Kamiya H, Murata N, Murata T, Iwai S, Matsukage A, Masutani C, Hanaoka F, Ohtsuka E	1993
Detection of an epitope, not required for polymerization, that is conserved between E.coli DNA polymerases I and III and bacteriophage T4 DNA polymerase.	Franden MA, McHenry CS	1988
Binding parameters and thermodynamics of the interaction of the human cytomegalovirus DNA polymerase accessory protein, UL44, with DNA: implications for the processivity mechanism.	Loregian A, Sinigalia E, Mercorelli B, Palù G, Coen DM	2007
Mismatched nucleotides may facilitate expansion of trinucleotide repeats in genetic diseases.	Nakayabu M, Miwa S, Suzuki M, Izuta S, Sobue G, Yoshida S	1998
Different structural states in oligonucleosomes are required for early versus late steps of base excision repair.	Nakanishi S, Prasad R, Wilson SH, Smerdon MJ	2007
Photosensitized [2 + 2] cycloaddition of N-acetylated cytosine affords stereoselective formation of cyclobutane pyrimidine dimer.	Yamamoto J, Nishiguchi K, Manabe K, Masutani C, Hanaoka F, Iwai S	2011
Human base excision repair complex is physically associated to DNA replication and cell cycle regulatory proteins.	Parlanti E, Locatelli GA, Maga G, Dogliotti E	2007
8-oxoguanine incorporation into DNA repeats in vitro and mismatch recognition by MutSalpha.	Macpherson P, Barone F, Maga G, Mazzei F, Karran P, Bignami M	2005
Dynamics of human replication factors in the elongation phase of DNA replication.	Masuda Y, Suzuki M, Piao J, Gu Y, Tsurimoto T, Kamiya K	2007
Incorporation of non-nucleoside triphosphate analogues opposite to an abasic site by human DNA polymerases beta and lambda.	Crespan E, Zanoli S, Khandazhinskaya A, Shevelev IV, Jasko M, Alexandrova L, Kukhanova M, Blanca G, Villani G, Hübscher U, Spadari S, Maga G	2005
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Deletion errors generated during replication of CAG repeats.	Kroutil LC, Kunkel TA	1999
Site specific mutagenesis: insertion of single noncomplementary nucleotides at specified sites by error-directed DNA polymerization.	Zakour RA, James EA, Loeb LA	1984
4'-Acylated thymidine 5'-triphosphates: a tool to increase selectivity towards HIV-1 reverse transcriptase.	Marx A, Amacker M, Stucki M, Hübscher U, Bickle TA, Giese B	1998
Substrate mimicry: HIV-1 reverse transcriptase recognizes 6-modified-3'-azido-2',3'-dideoxyguanosine-5'-triphosphates as adenosine analogs.	Herman BD, Schinazi RF, Zhang HW, Nettles JH, Stanton R, Detorio M, Obikhod A, Pradère U, Coats SJ, Mellors JW, Sluis-Cremer N	2011
A comparison of the fidelity of copying 5-methylcytosine and cytosine at a defined DNA template site.	Shen JC, Creighton S, Jones PA, Goodman MF	1992
Identification of DNA replication and cell cycle proteins that interact with PCNA.	Loor G, Zhang SJ, Zhang P, Toomey NL, Lee MY	1997
Quantitative analysis of the efficiency and mutagenic spectra of abasic lesion bypass catalyzed by human Y-family DNA polymerases.	Sherrer SM, Fiala KA, Fowler JD, Newmister SA, Pryor JM, Suo Z	2011
Involvement of DNA polymerase mu in the repair of a specific subset of DNA double-strand breaks in mammalian cells.	Capp JP, Boudsocq F, Besnard AG, Lopez BS, Cazaux C, Hoffmann JS, Canitrot Y	2007
Species specificity of human RPA in simian virus 40 DNA replication lies in T-antigen-dependent RNA primer synthesis.	Wang M, Park JS, Ishiai M, Hurwitz J, Lee SH	2000
Genomewide and biochemical analyses of DNA-binding activity of Cdc6/Orc1 and Mcm proteins in Pyrococcus sp.	Matsunaga F, Glatigny A, Mucchielli-Giorgi MH, Agier N, Delacroix H, Marisa L, Durosay P, Ishino Y, Aggerbeck L, Forterre P	2007
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Response of human REV1 to different DNA damage: preferential dCMP insertion opposite the lesion.	Zhang Y, Wu X, Rechkoblit O, Geacintov NE, Taylor JS, Wang Z	2002
Binary system for selective photoaffinity labeling of base excision repair DNA polymerases.	Lavrik OI, Kolpashchikov DM, Prasad R, Sobol RW, Wilson SH	2002
Up-regulation of base excision repair correlates with enhanced protection against a DNA damaging agent in mouse cell lines.	Chen KH, Yakes FM, Srivastava DK, Singhal RK, Sobol RW, Horton JK, Van Houten B, Wilson SH	1998
Subunits of human replication protein A are crosslinked by photoreactive primers synthesized by DNA polymerases.	Lavrik OI, Nasheuer HP, Weisshart K, Wold MS, Prasad R, Beard WA, Wilson SH, Favre A	1998
The human DNA polymerase beta gene structure. Evidence of alternative splicing in gene expression.	Chyan YJ, Ackerman S, Shepherd NS, McBride OW, Widen SG, Wilson SH, Wood TG	1994
Yeast open reading frame YCR14C encodes a DNA beta-polymerase-like enzyme.	Prasad R, Widen SG, Singhal RK, Watkins J, Prakash L, Wilson SH	1993
Mammalian beta-polymerase promoter: phosphorylation of ATF/CRE-binding protein and regulation of DNA binding.	Englander EW, Widen SG, Wilson SH	1991
Protein binding elements in the human beta-polymerase promoter.	Englander EW, Wilson SH	1990
Factors involved in the initiation of phage phi 29 DNA replication in vitro: requirement of the gene 2 product for the formation of the protein p3-dAMP complex.	Blanco L, Garcìa JA, Peñalva MA, Salas M	1983
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Mutational analysis of the HIV-1 auxiliary protein Vif identifies independent domains important for the physical and functional interaction with HIV-1 reverse transcriptase.	Kataropoulou A, Bovolenta C, Belfiore A, Trabatti S, Garbelli A, Porcellini S, Lupo R, Maga G	2009
Transcriptional regulation of the Drosophila CycA gene by the DNA replication-related element (DRE) and DRE binding factor (DREF).	Ohno K, Hirose F, Sakaguchi K, Nishida Y, Matsukage A	1996
Chemical synthesis and translesion replication of a cis-syn cyclobutane thymine-uracil dimer.	Takasawa K, Masutani C, Hanaoka F, Iwai S	2004
Reconstitution of the base excision repair pathway for 7,8-dihydro-8-oxoguanine with purified human proteins.	Pascucci B, Maga G, Hübscher U, Bjoras M, Seeberg E, Hickson ID, Villani G, Giordano C, Cellai L, Dogliotti E	2002
Stereospecificity of human DNA polymerases alpha, beta, gamma, delta and epsilon, HIV-reverse transcriptase, HSV-1 DNA polymerase, calf thymus terminal transferase and Escherichia coli DNA polymerase I in recognizing D- and L-thymidine 5'-triphosphate as substrate.	Focher F, Maga G, Bendiscioli A, Capobianco M, Colonna F, Garbesi A, Spadari S	1995
Mutagenicity and pausing of HIV reverse transcriptase during HIV plus-strand DNA synthesis.	Ji J, Hoffmann JS, Loeb L	1994
Mammalian DNA helicase.	Hübscher U, Stalder HP	1985
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The large subunit of HIV-1 reverse transcriptase interacts with beta-actin.	Hottiger M, Gramatikoff K, Georgiev O, Chaponnier C, Schaffner W, Hübscher U	1995
DNA unwinding by replication protein A is a property of the 70 kDa subunit and is facilitated by phosphorylation of the 32 kDa subunit.	Georgaki A, Hübscher U	1993
Isolation of human Dna2 endonuclease and characterization of its enzymatic properties.	Kim JH, Kim HD, Ryu GH, Kim DH, Hurwitz J, Seo YS	2006
REV1 and polymerase {zeta} facilitate homologous recombination repair.	Sharma S, Hicks JK, Chute CL, Brennan JR, Ahn JY, Glover TW, Canman CE	2011
Rapid incorporation kinetics and improved fidelity of a novel class of 3'-OH unblocked reversible terminators.	Gardner AF, Wang J, Wu W, Karouby J, Li H, Stupi BP, Jack WE, Hersh MN, Metzker ML	2012
Single-molecule microscopy reveals new insights into nucleotide selection by DNA polymerase I.	Markiewicz RP, Vrtis KB, Rueda D, Romano LJ	2012
Involvement of Werner syndrome protein in MUTYH-mediated repair of oxidative DNA damage.	Kanagaraj R, Parasuraman P, Mihaljevic B, van Loon B, Burdova K, König C, Furrer A, Bohr VA, Hübscher U, Janscak P	2012
The catalytic cycle for ribonucleotide incorporation by human DNA Pol λ	Gosavi RA, Moon AF, Kunkel TA, Pedersen LC, Bebenek K	2012
Selective disruption of the DNA polymerase III α-β complex by the umuD gene products.	Silva MC, Nevin P, Ronayne EA, Beuning PJ	2012
Pol β associated complex and base excision repair factors in mouse fibroblasts.	Prasad R, Williams JG, Hou EW, Wilson SH	2012
Interaction between Escherichia coli DNA polymerase IV and single-stranded DNA-binding protein is required for DNA synthesis on SSB-coated DNA.	Furukohri A, Nishikawa Y, Akiyama MT, Maki H	2012
Silencing of human DNA polymerase λ causes replication stress and is synthetically lethal with an impaired S phase checkpoint.	Zucca E, Bertoletti F, Wimmer U, Ferrari E, Mazzini G, Khoronenkova SV, Grosse N, van Loon B, Dianov GL, Hübscher U, Maga G	2012
A four-subunit DNA polymerase ζ complex containing Pol δ accessory subunits is essential for PCNA-mediated mutagenesis.	Makarova AV, Stodola JL, Burgers PM	2012
DNA expansions generated by human Polμ on iterative sequences.	Aza A, Martin MJ, Juarez R, Blanco L, Terrados G	2012
DNA polymerase minor groove interactions modulate mutagenic bypass of a templating 8-oxoguanine lesion.	Freudenthal BD, Beard WA, Wilson SH	2012
DNA stabilization at the Bacillus subtilis PolX core--a binding model to coordinate polymerase, AP-endonuclease and 3'-5' exonuclease activities.	Baños B, Villar L, Salas M, de Vega M	2012
Higher fidelity of RNA-dependent DNA mispair extension by M184V drug-resistant than wild-type reverse transcriptase of human immunodeficiency virus type 1.	Hsu M, Inouye P, Rezende L, Richard N, Li Z, Prasad VR, Wainberg MA	1997
Biologic activities of poly (2-azaadenylic acid) and poly (2-azainosinic acid).	De Clercq E, Huang GF, Torrence PF, Fukui T, Kakiuchi N, Ikehara M	1977
Ribonucleotides and manganese ions improve non-homologous end joining by human Polμ	Martin MJ, Garcia-Ortiz MV, Esteban V, Blanco L	2012
Role of purine N-3 in the biologic activities of poly(A) and poly(I).	De Clercq E, Torrence PF, Fukui T, Ikehara M	1976
Preferred WMSA catalytic mechanism of the nucleotidyl transfer reaction in human DNA polymerase κ elucidates error-free bypass of a bulky DNA lesion.	Lior-Hoffmann L, Wang L, Wang S, Geacintov NE, Broyde S, Zhang Y	2012
The effect of mutations in the HIV-1 nucleocapsid protein on strand transfer in cell-free reverse transcription reactions.	Hsu M, Rong L, de Rocquigny H, Roques BP, Wainberg MA	2000
Enhanced impairment of chain elongation by inhibitors of HIV reverse transcriptase in cell-free reactions yielding longer DNA products.	Quan Y, Liang C, Inouye P, Wainberg MA	1998
Inhibition of oncornavirus functions by poly (2-methylthioinosinic acid).	De Clercq E, Billiau A, Hattori M, Ikehara M	1975
Paradoxical effect of Simian virus 40 enhancer on the function of mouse DNA polymerase beta gene promoter.	Yamaguchi M, Obata Y, Matsukage A	1989
Transcriptional regulation of the Drosophila-raf proto-oncogene by the DNA replication-related element (DRE)/DRE-binding factor (DREF) system.	Ryu JR, Choi TY, Kwon EJ, Lee WH, Nishida Y, Hayashi Y, Matsukage A, Yamaguchi M, Yoo MA	1997
Mouse DNA polymerase beta gene promoter: fine mapping and involvement of Sp1-like mouse transcription factor in its function.	Yamaguchi M, Hayashi Y, Matsukage A	1988
Mechanism of inhibition of adenovirus DNA replication by the acyclic nucleoside triphosphate analogue (S)-HPMPApp: influence of the adenovirus DNA binding protein.	Mul YM, van Miltenburg RT, De Clercq E, van der Vliet PC	1989
Mitochondrial DNA copy number is regulated in a tissue specific manner by DNA methylation of the nuclear-encoded DNA polymerase gamma A.	Kelly RD, Mahmud A, McKenzie M, Trounce IA, St John JC	2012
A high-throughput and quantitative method to assess the mutagenic potential of translesion DNA synthesis.	Taggart DJ, Camerlengo TL, Harrison JK, Sherrer SM, Kshetry AK, Taylor JS, Huang K, Suo Z	2013
Reconstitution of recombination-associated DNA synthesis with human proteins.	Sneeden JL, Grossi SM, Tappin I, Hurwitz J, Heyer WD	2013
Trinucleotide repeat deletion via a unique hairpin bypass by DNA polymerase β and alternate flap cleavage by flap endonuclease 1.	Xu M, Gabison J, Liu Y	2013
Replication of a carcinogenic nitropyrene DNA lesion by human Y-family DNA polymerase.	Kirouac KN, Basu AK, Ling H	2013
Differential susceptibilities of DNA polymerases-alpha and -beta to polyanions.	Shimada T, Yamada M, Miwa M, Nagano H, Mano Y	1978
A non-catalytic role of DNA polymerase η in recruiting Rad18 and promoting PCNA monoubiquitination at stalled replication forks.	Durando M, Tateishi S, Vaziri C	2013
A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.	Sharma A, Kottur J, Narayanan N, Nair DT	2013
Observations on template-specific conditions for DNA synthesis by avian myeloblastosis virus DNA polymerase.	Marcus SL, Modak MJ	1976
Alteration in the cavity size adjacent to the active site of RB69 DNA polymerase changes its conformational dynamics.	Xia S, Wood M, Bradley MJ, De La Cruz EM, Konigsberg WH	2013
Novel inhibition of archaeal family-D DNA polymerase by uracil.	Richardson TT, Gilroy L, Ishino Y, Connolly BA, Henneke G	2013
Proofreading exonuclease on a tether: the complex between the E. coli DNA polymerase III subunits α, epsilon, θ and β reveals a highly flexible arrangement of the proofreading domain.	Ozawa K, Horan NP, Robinson A, Yagi H, Hill FR, Jergic S, Xu ZQ, Loscha KV, Li N, Tehei M, Oakley AJ, Otting G, Huber T, Dixon NE	2013
DNA polymerase δ stalls on telomeric lagging strand templates independently from G-quadruplex formation.	Lormand JD, Buncher N, Murphy CT, Kaur P, Lee MY, Burgers P, Wang H, Kunkel TA, Opresko PL	2013
DNA polymerases ζ and Rev1 mediate error-prone bypass of non-B DNA structures.	Northam MR, Moore EA, Mertz TM, Binz SK, Stith CM, Stepchenkova EI, Wendt KL, Burgers PM, Shcherbakova PV	2013
Carcinogenic adducts induce distinct DNA polymerase binding orientations.	Vrtis KB, Markiewicz RP, Romano LJ, Rueda D	2013
A cyclobutane thymine-N4-methylcytosine dimer is resistant to hydrolysis but strongly blocks DNA synthesis.	Yamamoto J, Oyama T, Kunishi T, Masutani C, Hanaoka F, Iwai S	2013
Sulfolobus chromatin proteins modulate strand displacement by DNA polymerase B1.	Sun F, Huang L	2013
The C-terminus of Dpb2 is required for interaction with Pol2 and for cell viability.	Isoz I, Persson U, Volkov K, Johansson E	2012
Evidence for lesion bypass by yeast replicative DNA polymerases during DNA damage.	Sabouri N, Viberg J, Goyal DK, Johansson E, Chabes A	2008
PIP degron proteins, substrates of CRL4Cdt2, and not PIP boxes, interfere with DNA polymerase η and κ focus formation on UV damage.	Tsanov N, Kermi C, Coulombe P, van der Laan S, Hodroj D, Maiorano D	2014
Nucleotide selection by the Y-family DNA polymerase Dpo4 involves template translocation and misalignment.	Brenlla A, Markiewicz RP, Rueda D, Romano LJ	2014
Oxidative stress-induced mutagenesis in single-strand DNA occurs primarily at cytosines and is DNA polymerase zeta-dependent only for adenines and guanines.	Degtyareva NP, Heyburn L, Sterling JF, Resnick MA, Gordenin DA, Doetsch PW	2013
Real-time single-molecule studies of the motions of DNA polymerase fingers illuminate DNA synthesis mechanisms.	Evans GW, Hohlbein J, Craggs TD, Aigrain L, Kapanidis AN	2015
Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta.	Boudsocq F, Iwai S, Hanaoka F, Woodgate R	2001

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