Nucleic acids research

(Nucleic Acids Res) ISSNs: , 1362-4962

References in Nucleic acids research:

Title Authors Year
Acyclic and dideoxy terminator preferences denote divergent sugar recognition by archaeon and Taq DNA polymerases. Gardner AF, Jack WE 2002
Further studies on partially purified calf thymus DNA polymerase a. McKune K, Holmes AM 1979
Protein splicing removes intervening sequences in an archaea DNA polymerase. Hodges RA, Perler FB, Noren CJ, Jack WE 1992
MIP1 DNA polymerase of S. cerevisiae: structural similarity with the E. coli DNA polymerase I-type enzymes. Blanco L, Bernad A, Salas M 1991
The high fidelity and unique error signature of human DNA polymerase epsilon. Korona DA, Lecompte KG, Pursell ZF 2011
Optimal conditions to use Pfu exo(-) DNA polymerase for highly efficient ligation-mediated polymerase chain reaction protocols. Angers M, Cloutier JF, Castonguay A, Drouin R 2001
PCR performance of the B-type DNA polymerase from the thermophilic euryarchaeon Thermococcus aggregans improved by mutations in the Y-GG/A motif. Böhlke K, Pisani FM, Vorgias CE, Frey B, Sobek H, Rossi M, Antranikian G 2000
S1 plasmid from cms-S-maize mitochondria encodes a viral type DNA-polymerase. Kuzmin EV, Levchenko IV 1987
Comparison of single regulated lentiviral vectors with rtTA expression driven by an autoregulatory loop or a constitutive promoter. Markusic D, Oude-Elferink R, Das AT, Berkhout B, Seppen J 2005
Aphidicolin inhibits DNA polymerase II of Escherichia coli, an alpha-like DNA polymerase. Chen H, Lawrence CB, Bryan SK, Moses RE 1990
The effects of the ring fragmentation product of thymidine C5-hydrate on phosphodiesterases and klenow (exo-) fragment. Matray TJ, Haxton KJ, Greenberg MM 1995
The effect of bisulfite modification on the template activity of DNA for DNA polymerase I. Kai K, Tsuruo T, Hayatsu H 1974
Compilation, alignment, and phylogenetic relationships of DNA polymerases. Braithwaite DK, Ito J 1993
Specific inhibitors of eukaryotic DNA synthesis and DNA polymerase alpha, 3-deoxyaphidicolin and aphidicolin-17-monoacetate. Haraguchi T, Oguro M, Nagano H, Ichihara A, Sakamura S 1983
The accessory subunit of mitochondrial DNA polymerase gamma determines the DNA content of mitochondrial nucleoids in human cultured cells. Di Re M, Sembongi H, He J, Reyes A, Yasukawa T, Martinsson P, Bailey LJ, Goffart S, Boyd-Kirkup JD, Wong TS, Fersht AR, Spelbrink JN, Holt IJ 2009
Single-nucleotide base excision repair DNA polymerase activity in C. elegans in the absence of DNA polymerase {beta} Asagoshi K, Lehmann W, Braithwaite EK, Santana-Santos L, Prasad R, Freedman JH, Van Houten B, Wilson SH 2011
Molecular architecture of a multifunctional MCM complex. Sanchez-Berrondo J, Mesa P, Ibarra A, Martínez-Jiménez MI, Blanco L, Méndez J, Boskovic J, Montoya G 2011
The DNA polymerase gene from the hyperthermophilic marine archaebacterium, Pyrococcus furiosus, shows sequence homology with alpha-like DNA polymerases. Mathur EJ, Adams MW, Callen WN, Cline JM 1991
Analysis and suppression of DNA polymerase pauses associated with a trinucleotide consensus. Mytelka DS, Chamberlin MJ 1996
Interactions of calf thymus DNA polymerase alpha with primer/templates. Thompson HC, Sheaff RJ, Kuchta RD 1995
Apparent stimulation of calf thymus DNA polymerase alpha by ATP. Tan CK, So MJ, Downey KM, So AG 1987
Promiscuous DNA synthesis by human DNA polymerase θ Hogg M, Sauer-Eriksson AE, Johansson E 2011
Epstein-Barr virus-encoded microRNA miR-BART2 down-regulates the viral DNA polymerase BALF5. Barth S, Pfuhl T, Mamiani A, Ehses C, Roemer K, Kremmer E, Jäker C, Höck J, Meister G, Grässer FA 2008
On the fidelity of DNA polymerase alpha: the influence of alpha-thio dNTPs, Mn2+ and mismatch repair. Rienitz A, Grosse F, Blöcker H, Frank R, Krauss G 1985
Identification of delta helicase as the bovine homolog of HUPF1: demonstration of an interaction with the third subunit of DNA polymerase delta. Carastro LM, Tan CK, Selg M, Jack HM, So AG, Downey KM 2002
Taq DNA polymerase slippage mutation rates measured by PCR and quasi-likelihood analysis: (CA/GT)n and (A/T)n microsatellites. Shinde D, Lai Y, Sun F, Arnheim N 2003
Evolution of internal eliminated segments and scrambling in the micronuclear gene encoding DNA polymerase alpha in two Oxytricha species. Hoffman DC, Prescott DM 1997
Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors. Klumpp K, Hang JQ, Rajendran S, Yang Y, Derosier A, Wong Kai In P, Overton H, Parkes KE, Cammack N, Martin JA 2003
DNA polymerase alpha and models for proofreading. Abbotts J, Loeb LA 1985
Steady state kinetics and inhibition of HIV-1 reverse transcriptase by a non-nucleoside dipyridodiazepinone, BI-RG-587, using a heteropolymeric template. Kopp EB, Miglietta JJ, Shrutkowski AG, Shih CK, Grob PM, Skoog MT 1991
The proofreading domain of Escherichia coli DNA polymerase I and other DNA and/or RNA exonuclease domains. Moser MJ, Holley WR, Chatterjee A, Mian IS 1997
The Bloom's syndrome helicase (BLM) interacts physically and functionally with p12, the smallest subunit of human DNA polymerase delta. Selak N, Bachrati CZ, Shevelev IV, Dietschy T, van Loon B, Jacob A, Hübscher U, Hoheisel JD, Hickson ID, Stagljar I 2008
Further characterization of a cell-free system for measuring replicative and repair DNA synthesis with cultured human fibroblasts and evidence for the involvement of DNA polymerase alpha in DNA repair. Ciarrocchi G, Jose JG, Linn S 1979
Evolutionary clues to DNA polymerase III beta clamp structural mechanisms. Neuwald AF 2003
Site-directed mutagenesis analysis of the structural interaction of the single-strand-break repair protein, X-ray cross-complementing group 1, with DNA polymerase beta. Marintchev A, Gryk MR, Mullen GP 2003
A new anti conformation for N-(deoxyguanosin-8-yl)-2-acetylaminofluorene (AAF-dG) allows Watson-Crick pairing in the Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4). Wang L, Broyde S 2006
A novel DNA polymerase homologous to Escherichia coli DNA polymerase I from a higher plant, rice (Oryza sativa L.). Kimura S, Uchiyama Y, Kasai N, Namekawa S, Saotome A, Ueda T, Ando T, Ishibashi T, Oshige M, Furukawa T, Yamamoto T, Hashimoto J, Sakaguchi K 2002
The fidelity of DNA synthesis by yeast DNA polymerase zeta alone and with accessory proteins. Zhong X, Garg P, Stith CM, Nick McElhinny SA, Kissling GE, Burgers PM, Kunkel TA 2006
Butylanilinouracil: a selective inhibitor of HeLa cell DNA synthesis and HeLa cell DNA polymerase alpha. Wright GE, Baril EF, Brown NC 1980
Slippage of DNA polymerase I during synthesis of ds-cDNA. Devos R, Tavernier J, Fiers W 1988
Betalactam antibiotics interfere with eukaryotic DNA-replication by inhibiting DNA polymerase alpha. Do UH, Neftel KA, Spadari S, Hübscher U 1987
The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases delta and eta. McCulloch SD, Kokoska RJ, Garg P, Burgers PM, Kunkel TA 2009
Elongation of repetitive DNA by DNA polymerase from a hyperthermophilic bacterium Thermus thermophilus. Ogata N, Morino H 2000
Cold-sensitive mutants of Taq DNA polymerase provide a hot start for PCR. Kermekchiev MB, Tzekov A, Barnes WM 2003
Site-directed mutagenesis in the DNA linking site of bacteriophage phi 29 terminal protein: isolation and characterization of a Ser232----Thr mutant. Garmendia C, Salas M, Hermoso JM 1988
Solution structures of 2 : 1 and 1 : 1 DNA polymerase-DNA complexes probed by ultracentrifugation and small-angle X-ray scattering. Tang KH, Niebuhr M, Aulabaugh A, Tsai MD 2008
Phi29 DNA polymerase residues Tyr59, His61 and Phe69 of the highly conserved ExoII motif are essential for interaction with the terminal protein. Eisenbrandt R, Lázaro JM, Salas M, de Vega M 2002
Error-prone lesion bypass by human DNA polymerase eta. Zhang Y, Yuan F, Wu X, Rechkoblit O, Taylor JS, Geacintov NE, Wang Z 2000
Involvement of the TPR2 subdomain movement in the activities of phi29 DNA polymerase. Rodríguez I, Lázaro JM, Salas M, de Vega M 2009
A neutralizing antibody against human DNA polymerase epsilon inhibits cellular but not SV40 DNA replication. Pospiech H, Kursula I, Abdel-Aziz W, Malkas L, Uitto L, Kastelli M, Vihinen-Ranta M, Eskelinen S, Syväoja JE 1999
A rapid and efficient one-tube PCR-based mutagenesis technique using Pfu DNA polymerase. Picard V, Ersdal-Badju E, Lu A, Bock SC 1994
Crystal structures of oligonucleotides including the integrase processing site of the Moloney murine leukemia virus. Montaño SP, Coté ML, Roth MJ, Georgiadis MM 2006
The incorporation of O6-methyldeoxyguanosine and O4-methyldeoxythymidine monophosphates into DNA by DNA polymerases I and alpha. Hall JA, Saffhill R 1983
5-Hydroxypyrimidine deoxynucleoside triphosphates are more efficiently incorporated into DNA by exonuclease-free Klenow fragment than 8-oxopurine deoxynucleoside triphosphates. Purmal AA, Kow YW, Wallace SS 1994
The effect of the 3',5' thiophosphoryl linkage on the exonuclease activities of T4 polymerase and the Klenow fragment. Gupta AP, Benkovic PA, Benkovic SJ 1984
A real-time fluorescence method for enzymatic characterization of specialized human DNA polymerases. Dorjsuren D, Wilson DM, Beard WA, McDonald JP, Austin CP, Woodgate R, Wilson SH, Simeonov A 2009
Loop II of DNA polymerase beta is important for polymerization activity and fidelity. Lin GC, Jaeger J, Sweasy JB 2007
Mammalian cyclin/PCNA (DNA polymerase delta auxiliary protein) stimulates processive DNA synthesis by yeast DNA polymerase III. Burgers PM 1988
Binding of phage Phi29 architectural protein p6 to the viral genome: evidence for topological restriction of the phage linear DNA. González-Huici V, Alcorlo M, Salas M, Hermoso JM 2004
Two regions in human DNA polymerase beta mRNA suppress translation in Escherichia coli. Date T, Tanihara K, Yamamoto S, Nomura N, Matsukage A 1992
Extension of base mispairs by Taq DNA polymerase: implications for single nucleotide discrimination in PCR. Huang MM, Arnheim N, Goodman MF 1992
Involvement of phi29 DNA polymerase thumb subdomain in the proper coordination of synthesis and degradation during DNA replication. Pérez-Arnaiz P, Lázaro JM, Salas M, de Vega M 2006
A positively charged residue of phi29 DNA polymerase, highly conserved in DNA polymerases from families A and B, is involved in binding the incoming nucleotide. Truniger V, Lázaro JM, Esteban FJ, Blanco L, Salas M 2002
Function of the C-terminus of phi29 DNA polymerase in DNA and terminal protein binding. Truniger V, Lázaro JM, Salas M 2004
Structure and expression during development of Drosophila melanogaster gene for DNA polymerase alpha. Hirose F, Yamaguchi M, Nishida Y, Masutani M, Miyazawa H, Hanaoka F, Matsukage A 1991
Rat DNA polymerase beta gene can join in excision repair of Escherichia coli. Ohnishi T, Yuba S, Date T, Utsumi H, Matsukage A 1990
Mismatched dNTP incorporation by DNA polymerase beta does not proceed via globally different conformational pathways. Tang KH, Niebuhr M, Tung CS, Chan HC, Chou CC, Tsai MD 2008
Synchronization of HeLa cell cultures by inhibition of DNA polymerase alpha with aphidicolin. Pedrali-Noy G, Spadari S, Miller-Faurès A, Miller AO, Kruppa J, Koch G 1980
Cleavage of adenine-modified functionalized DNA by type II restriction endonucleases. Macícková-Cahová H, Hocek M 2009
Fluorescence of 2-aminopurine reveals rapid conformational changes in the RB69 DNA polymerase-primer/template complexes upon binding and incorporation of matched deoxynucleoside triphosphates. Zhang H, Cao W, Zakharova E, Konigsberg WH, De La Cruz EM 2007
Selection of template initiation sites and the lengths of RNA primers synthesized by DNA primase are strongly affected by its organization in a multiprotein DNA polymerase alpha complex. Vishwanatha JK, Yamaguchi M, DePamphilis ML, Baril EF 1986
Enzymatic switching for efficient and accurate translesion DNA replication. McCulloch SD, Kokoska RJ, Chilkova O, Welch CM, Johansson E, Burgers PM, Kunkel TA 2004
Role of DNA polymerase eta in the bypass of abasic sites in yeast cells. Zhao B, Xie Z, Shen H, Wang Z 2004
Effect of 2',3'-dideoxythymidine-5'-triphosphate on HeLa cell in vitro DNA synthesis: evidence that DNA polymerase alpha is the only polymerase required for cellular DNA replication. Waqar MA, Evans MJ, Huberman JA 1978
Evidences for the function of DNA polymerase-beta in unscheduled DNA synthesis. Wawra E, Dolejs I 1979
Calf thymus DNA polymerase delta: purification, biochemical and functional properties of the enzyme after its separation from DNA polymerase alpha, a DNA dependent ATPase and proliferating cell nuclear antigen. Focher F, Spadari S, Ginelli B, Hottiger M, Gassmann M, Hübscher U 1988
Low-fidelity DNA synthesis by the L979F mutator derivative of Saccharomyces cerevisiae DNA polymerase zeta. Stone JE, Kissling GE, Lujan SA, Rogozin IB, Stith CM, Burgers PM, Kunkel TA 2009
Analysis of inhibitors of bacteriophage T4 DNA polymerase. Khan NN, Reha-Krantz LJ, Wright GE 1994
Purification and characterization of porcine liver DNA polymerase gamma: utilization of dUTP and dTTP during in vitro DNA synthesis. Mosbaugh DW 1988
Human DNA polymerase theta possesses 5'-dRP lyase activity and functions in single-nucleotide base excision repair in vitro. Prasad R, Longley MJ, Sharief FS, Hou EW, Copeland WC, Wilson SH 2009
The proofreading exonuclease subunit epsilon of Escherichia coli DNA polymerase III is tethered to the polymerase subunit alpha via a flexible linker. Ozawa K, Jergic S, Park AY, Dixon NE, Otting G 2008
Proofreading exonuclease activity of human DNA polymerase delta and its effects on lesion-bypass DNA synthesis. Fazlieva R, Spittle CS, Morrissey D, Hayashi H, Yan H, Matsumoto Y 2009
Molecular basis for the enantioselectivity of HIV-1 reverse transcriptase: role of the 3'-hydroxyl group of the L-(beta)-ribose in chiral discrimination between D- and L-enantiomers of deoxy- and dideoxy-nucleoside triphosphate analogs. Maga G, Amacker M, Hübscher U, Gosselin G, Imbach JL, Mathé C, Faraj A, Sommadossi JP, Spadari S 1999
Enzymatic properties of rat DNA polymerase beta mutants obtained by randomized mutagenesis. Skandalis A, Loeb LA 2001
Thymine glycols and urea residues in M13 DNA constitute replicative blocks in vitro. Ide H, Kow YW, Wallace SS 1985
Human DNA polymerase kappa synthesizes DNA with extraordinarily low fidelity. Zhang Y, Yuan F, Xin H, Wu X, Rajpal DK, Yang D, Wang Z 2000
A sensitive scanning technology for low frequency nuclear point mutations in human genomic DNA. Li-Sucholeiki XC, Thilly WG 2000
Methylglyoxal, an endogenous aldehyde, crosslinks DNA polymerase and the substrate DNA. Murata-Kamiya N, Kamiya H 2001
Misincorporation of dAMP opposite 2-hydroxyadenine, an oxidative form of adenine. Kamiya H, Ueda T, Ohgi T, Matsukage A, Kasai H 1995
Misincorporation during DNA synthesis, analyzed by gel electrophoresis. Hillebrand GG, McCluskey AH, Abbott KA, Revich GG, Beattie KL 1984
Functional association of poly(ADP-ribose) polymerase with DNA polymerase alpha-primase complex: a link between DNA strand break detection and DNA replication. Dantzer F, Nasheuer HP, Vonesch JL, de Murcia G, Ménissier-de Murcia J 1998
Mechanistic consequences of temperature on DNA polymerization catalyzed by a Y-family DNA polymerase. Fiala KA, Sherrer SM, Brown JA, Suo Z 2008
Differential discrimination of DNA polymerase for variants of the non-standard nucleobase pair between xanthosine and 2,4-diaminopyrimidine, two components of an expanded genetic alphabet. Lutz MJ, Held HA, Hottiger M, Hübscher U, Benner SA 1996
Strategic down-regulation of DNA polymerase beta by antisense RNA sensitizes mammalian cells to specific DNA damaging agents. Horton JK, Srivastava DK, Zmudzka BZ, Wilson SH 1995
High fidelity DNA synthesis by the Thermus aquaticus DNA polymerase. Eckert KA, Kunkel TA 1990
DNA polymerase I and a protein complex bind specifically to E. coli palindromic unit highly repetitive DNA: implications for bacterial chromosome organization. Gilson E, Perrin D, Hofnung M 1990
RPA and PCNA suppress formation of large deletion errors by yeast DNA polymerase delta. Fortune JM, Stith CM, Kissling GE, Burgers PM, Kunkel TA 2006
The checkpoint clamp, Rad9-Rad1-Hus1 complex, preferentially stimulates the activity of apurinic/apyrimidinic endonuclease 1 and DNA polymerase beta in long patch base excision repair. Gembka A, Toueille M, Smirnova E, Poltz R, Ferrari E, Villani G, Hübscher U 2007
Sequence determination of nucleic acids containing 5-methylisocytosine and isoguanine: identification and insight into polymerase replication of the non-natural nucleobases. Ahle JD, Barr S, Chin AM, Battersby TR 2005
Following an environmental carcinogen N2-dG adduct through replication: elucidating blockage and bypass in a high-fidelity DNA polymerase. Xu P, Oum L, Beese LS, Geacintov NE, Broyde S 2007
Translesional synthesis on a DNA template containing N2-methyl-2'-deoxyguanosine catalyzed by the Klenow fragment of Escherichia coli DNA polymerase I. Yasui M, Matsui S, Ihara M, Laxmi YR, Shibutani S, Matsuda T 2001
Assembly of DNA polymerase delta and epsilon holoenzymes depends on the geometry of the DNA template. Podust LM, Podust VN, Floth C, Hübscher U 1994
Purification and characterization of a DNA polymerase from the cyanobacterium Anacystis nidulans R2. Lin HJ, Cannon GC, Heinhorst S 1990
Characterization of the 3' exonuclease subunit DP1 of Methanococcus jannaschii replicative DNA polymerase D. Jokela M, Eskelinen A, Pospiech H, Rouvinen J, Syväoja JE 2004
Solution structure of Domains IVa and V of the tau subunit of Escherichia coli DNA polymerase III and interaction with the alpha subunit. Su XC, Jergic S, Keniry MA, Dixon NE, Otting G 2007
Regulation of B family DNA polymerase fidelity by a conserved active site residue: characterization of M644W, M644L and M644F mutants of yeast DNA polymerase epsilon. Pursell ZF, Isoz I, Lundström EB, Johansson E, Kunkel TA 2007
Translesion synthesis of acetylaminofluorene-dG adducts by DNA polymerase zeta is stimulated by yeast Rev1 protein. Guo D, Xie Z, Shen H, Zhao B, Wang Z 2004
Human replication protein A can suppress the intrinsic in vitro mutator phenotype of human DNA polymerase lambda. Maga G, Shevelev IV, Villani G, Spadari S, Hübscher U 2006
The inhibition of mitochondrial DNA polymerase gamma from animal cells by intercalating drugs. Tarrago-Litvak L, Viratelle O, Darriet D, Dalibart R, Graves PV, Litvak S 1978
Polbase: a repository of biochemical, genetic and structural information about DNA polymerases. Langhorst BW, Jack WE, Reha-Krantz L, Nichols NM 2011
The Werner syndrome protein operates in base excision repair and cooperates with DNA polymerase beta. Harrigan JA, Wilson DM, Prasad R, Opresko PL, Beck G, May A, Wilson SH, Bohr VA 2006
Characterization of DNA polymerase beta mRNA: cell-cycle and growth response in cultured human cells. Zmudzka BZ, Fornace A, Collins J, Wilson SH 1988
Structural and functional similarities of prokaryotic and eukaryotic DNA polymerase sliding clamps. Kelman Z, O'Donnell ME 1995
Mutations in the herpes simplex virus DNA polymerase gene conferring hypersensitivity to aphidicolin. Coen DM, Furman PA, Aschman DP, Schaffer PA 1983
Selective inhibition of HIV-1 reverse transcriptase-associated ribonuclease H activity by hydroxylated tropolones. Budihas SR, Gorshkova I, Gaidamakov SA, Wamiru A, Bona MK, Parniak MA, Crouch RJ, McMahon JB, Beutler JA, Le Grice SF 2005
Thymine glycol lesions terminate chain elongation by DNA polymerase I in vitro. Clark JM, Beardsley GP 1986
Mutagenesis of human DNA polymerase lambda: essential roles of Tyr505 and Phe506 for both DNA polymerase and terminal transferase activities. Shevelev IV, Blanca G, Villani G, Ramadan K, Spadari S, Hübscher U, Maga G 2003
Adenovirus DNA polymerase: domain organisation and interaction with preterminal protein. Parker EJ, Botting CH, Webster A, Hay RT 1998
Persistence of DNA synthesis arrest sites in the presence of T4 DNA polymerase and T4 gene 32, 44, 45 and 62 DNA polymerase accessory proteins. Charette MF, Weaver DT, DePamphilis ML 1986
Kinetics of error generation in homologous B-family DNA polymerases. Hogg M, Cooper W, Reha-Krantz LJ, Wallace SS 2006
The N-clasp of human DNA polymerase kappa promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions. Jia L, Geacintov NE, Broyde S 2008
DNA and RNA-DNA annealing activity associated with the tau subunit of the Escherichia coli DNA polymerase III holoenzyme. Kim S, Marians KJ 1995
N4-Methoxydeoxycytidine triphosphate is in the imino tautomeric form and substitutes for deoxythymidine triphosphate in primed poly d[A-T] synthesis with E. coli DNA polymerase I. Singer B, Fraenkel-Conrat H, Abbott LG, Spengler SJ 1984
The 3'-5' proofreading exonuclease of archaeal family-B DNA polymerase hinders the copying of template strand deaminated bases. Russell HJ, Richardson TT, Emptage K, Connolly BA 2009
Genetics of lagging strand DNA synthesis and maturation in fission yeast: suppression analysis links the Dna2-Cdc24 complex to DNA polymerase delta. Tanaka H, Ryu GH, Seo YS, MacNeill SA 2004
DNA structure and the Werner protein modulate human DNA polymerase delta-dependent replication dynamics within the common fragile site FRA16D. Shah SN, Opresko PL, Meng X, Lee MY, Eckert KA 2010
A specific loop in human DNA polymerase mu allows switching between creative and DNA-instructed synthesis. Juárez R, Ruiz JF, Nick McElhinny SA, Ramsden DA, Blanco L 2006
REV1 restrains DNA polymerase zeta to ensure frame fidelity during translesion synthesis of UV photoproducts in vivo. Szüts D, Marcus AP, Himoto M, Iwai S, Sale JE 2008
Design and characterization of N2-arylaminopurines which selectively inhibit replicative DNA synthesis and replication-specific DNA polymerases: guanine derivatives active on mammalian DNA polymerase alpha and bacterial DNA polymerase III. Wright GE, Baril EF, Brown VM, Brown NC 1982
In vitro conversion of MVM parvovirus single-stranded DNA to the replicative form by DNA polymerase alpha from Ehrlich ascites tumour cells. Faust EA, Rankin CD 1982
The C-terminal zinc finger of the catalytic subunit of DNA polymerase delta is responsible for direct interaction with the B-subunit. Sanchez Garcia J, Ciufo LF, Yang X, Kearsey SE, MacNeill SA 2004
The DNA polymerase lambda is required for the repair of non-compatible DNA double strand breaks by NHEJ in mammalian cells. Capp JP, Boudsocq F, Bertrand P, Laroche-Clary A, Pourquier P, Lopez BS, Cazaux C, Hoffmann JS, Canitrot Y 2006
Subspecies of DNA polymerase alpha from calf thymus with different fidelity in copying synthetic template-primers. Brosius S, Grosse F, Krauss G 1983
Human base excision repair enzymes apurinic/apyrimidinic endonuclease1 (APE1), DNA polymerase beta and poly(ADP-ribose) polymerase 1: interplay between strand-displacement DNA synthesis and proofreading exonuclease activity. Sukhanova MV, Khodyreva SN, Lebedeva NA, Prasad R, Wilson SH, Lavrik OI 2005
8-Hydroxyguanine in a mutational hotspot of the c-Ha-ras gene causes misreplication, 'action-at-a-distance' mutagenesis and inhibition of replication. Jałoszyński P, Masutani C, Hanaoka F, Perez AB, Nishimura S 2003
Human DNA polymerase beta polymorphism, Arg137Gln, impairs its polymerase activity and interaction with PCNA and the cellular base excision repair capacity. Guo Z, Zheng L, Dai H, Zhou M, Xu H, Shen B 2009
Evidence implying DNA polymerase beta function in excision repair. Siedlecki JA, Szyszko J, Pietrzykowska I, Zmudzka BZ 1980
Unique requirements for template primers of DNA polymerase beta from rat ascites hepatoma AH130 cells. Ono K, Ohashi A, Tanabe K, Matsukage A, Nishizawa M, Takahashi T 1979
Replication of poly dA and poly rA by a drosophila DNA polymerase. Brakel CL, Blumenthal AB 1978
Thermodynamics of the binding of Thermus aquaticus DNA polymerase to primed-template DNA. Datta K, LiCata VJ 2003
MDM2 interacts with the C-terminus of the catalytic subunit of DNA polymerase epsilon. Vlatkovic N, Guerrera S, Li Y, Linn S, Haines DS, Boyd MT 2000
Translesion replication of benzo[a]pyrene and benzo[c]phenanthrene diol epoxide adducts of deoxyadenosine and deoxyguanosine by human DNA polymerase iota. Frank EG, Sayer JM, Kroth H, Ohashi E, Ohmori H, Jerina DM, Woodgate R 2002
The N-terminal region of DNA polymerase delta catalytic subunit is necessary for holoenzyme function. Schumacher SB, Stucki M, Hübscher U 2000
Endogenous DNA polymerase activity in fractionated rat lever chromatin. Chan JY, Rodriguez LW, Becker FF 1977
Purification and characterization of DNA polymerase from the archaebacterium Sulfolobus acidocaldarius. Klimczak LJ, Grummt F, Burger KJ 1985
Levels of DNA polymerase-alpha and beta in normal and xeroderma pigmentosum fibroblasts. Bertazzoni U, Stefanini M, Pedrali-Noy G, Nuzzo F, Falaschi A 1977
Synthesis and properties of oligonucleotides containing 5-formyl-2'-deoxycytidine: in vitro DNA polymerase reactions on DNA templates containing 5-formyl-2'-deoxycytidine. Karino N, Ueno Y, Matsuda A 2001
Alterations of DNA-dependent DNA polymerase activities in the immature quail oviduct in response to estrogen stimulation. Rohde HJ, Müller WE, Zahn RK 1975
Escherichia coli RNA and DNA polymerase bypass of dihydrouracil: mutagenic potential via transcription and replication. Liu J, Doetsch PW 1998
The small subunits of human and mouse DNA polymerase epsilon are homologous to the second largest subunit of the yeast Saccharomyces cerevisiae DNA polymerase epsilon. Jokela M, Mäkiniemi M, Lehtonen S, Szpirer C, Hellman U, Syväoja JE 1998
The second subunit of DNA polymerase III (delta) is encoded by the HYS2 gene in Saccharomyces cerevisiae. Hashimoto K, Nakashima N, Ohara T, Maki S, Sugino A 1998
Molecular cloning, structure and expression of the yeast proliferating cell nuclear antigen gene. Bauer GA, Burgers PM 1990
Development and use of an in vitro HSV-tk forward mutation assay to study eukaryotic DNA polymerase processing of DNA alkyl lesions. Eckert KA, Hile SE, Vargo PL 1997
Studies of Schizosaccharomyces pombe DNA polymerase alpha at different stages of the cell cycle. Park H, Davis R, Wang TS 1995
Template-switching during DNA synthesis by Thermus aquaticus DNA polymerase I. Odelberg SJ, Weiss RB, Hata A, White R 1995
polA6, A mutation affecting the DNA binding capacity of DNA polymerase I. Kelly WS, Grindley ND 1976
Genetic identification and nucleotide sequence of the DNA polymerase gene of African swine fever virus. Martins A, Ribeiro G, Marques MI, Costa JV 1994
Sequences at the C-terminus of the herpes simplex virus type 1 UL30 protein are dispensable for DNA polymerase activity but not for viral origin-dependent DNA replication. Stow ND 1993
Loop 1 modulates the fidelity of DNA polymerase {lambda} Bebenek K, Garcia-Diaz M, Zhou RZ, Povirk LF, Kunkel TA 2010
Rapid purification of high-activity Taq DNA polymerase. Pluthero FG 1993
Ribonucleotidyl transferase in preparations of partially purified DNA polymerase alpha of the sea urchin. Morris PW, Racine FM 1978
Insertion of the T3 DNA polymerase thioredoxin binding domain enhances the processivity and fidelity of Taq DNA polymerase. Davidson JF, Fox R, Harris DD, Lyons-Abbott S, Loeb LA 2003
Calf thymus RF-C as an essential component for DNA polymerase delta and epsilon holoenzymes function. Podust VN, Georgaki A, Strack B, Hübscher U 1992
Mutants of Taq DNA polymerase resistant to PCR inhibitors allow DNA amplification from whole blood and crude soil samples. Kermekchiev MB, Kirilova LI, Vail EE, Barnes WM 2009
Excision repair of UV-damaged plasmid DNA in Xenopus oocytes is mediated by DNA polymerase alpha (and/or delta). Saxena JK, Hays JB, Ackerman EJ 1990
DNA sequencing with dye-labeled terminators and T7 DNA polymerase: effect of dyes and dNTPs on incorporation of dye-terminators and probability analysis of termination fragments. Lee LG, Connell CR, Woo SL, Cheng RD, McArdle BF, Fuller CW, Halloran ND, Wilson RK 1992
Further biochemical characterization of wheat DNA primase: possible functional implication of copurification with DNA polymerase A. Laquel P, Castroviejo M, Litvak S 1990
Mutations induced by DNA polymerase alpha upon in vitro replication of M13mp8(+) DNA. Reckmann B, Krauss G 1986
Cloning of PCR products after defined cohesive termini are created with T4 DNA polymerase. Stoker AW 1990
The evolutionary conservation of DNA polymerase alpha. Miller MA, Korn D, Wang TS 1988
A simplified procedure for the analysis of DNA polymerase III levels in Bacillus subtilis strains. Ciarrocchi G, Fortunato A, Attolini C, Falaschi A 1976
DNA polymerase delta, RFC and PCNA are required for repair synthesis of large looped heteroduplexes in Saccharomyces cerevisiae. Corrette-Bennett SE, Borgeson C, Sommer D, Burgers PM, Lahue RS 2004
Efficient isothermal expansion of human telomeric and minisatellite repeats by Thermococcus litoralis DNA polymerase. Hartig JS, Kool ET 2005
Overexpression of human DNA polymerase mu (Pol mu) in a Burkitt's lymphoma cell line affects the somatic hypermutation rate. Ruiz JF, Lucas D, García-Palomero E, Saez AI, González MA, Piris MA, Bernad A, Blanco L 2004
Deoxy- and dideoxynucleotide discrimination and identification of critical 5' nuclease domain residues of the DNA polymerase I from Mycobacterium tuberculosis. Mizrahi V, Huberts P 1996
Terminal labeling and addition of homopolymer tracts to duplex DNA fragments by terminal deoxynucleotidyl transferase. Roychoudhury R, Jay E, Wu R 1976
Partial purification and characterization of two cytoplasmic DNA polymerases from ungerminated wheat. Castroviejo M, Tarragó-Litvak L, Litvak S 1975
Synthesis and RNA polymerase incorporation of the degenerate ribonucleotide analogue rPTP. Moriyama K, Negishi K, Briggs MS, Smith CL, Hill F, Churcher MJ, Brown DM, Loakes D 1998
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Proofreading exonuclease on a tether: the complex between the E. coli DNA polymerase III subunits α, epsilon, θ and β reveals a highly flexible arrangement of the proofreading domain. Ozawa K, Horan NP, Robinson A, Yagi H, Hill FR, Jergic S, Xu ZQ, Loscha KV, Li N, Tehei M, Oakley AJ, Otting G, Huber T, Dixon NE 2013
DNA polymerase δ stalls on telomeric lagging strand templates independently from G-quadruplex formation. Lormand JD, Buncher N, Murphy CT, Kaur P, Lee MY, Burgers P, Wang H, Kunkel TA, Opresko PL 2013
DNA polymerases ζ and Rev1 mediate error-prone bypass of non-B DNA structures. Northam MR, Moore EA, Mertz TM, Binz SK, Stith CM, Stepchenkova EI, Wendt KL, Burgers PM, Shcherbakova PV 2013
Carcinogenic adducts induce distinct DNA polymerase binding orientations. Vrtis KB, Markiewicz RP, Romano LJ, Rueda D 2013
A cyclobutane thymine-N4-methylcytosine dimer is resistant to hydrolysis but strongly blocks DNA synthesis. Yamamoto J, Oyama T, Kunishi T, Masutani C, Hanaoka F, Iwai S 2013
Sulfolobus chromatin proteins modulate strand displacement by DNA polymerase B1. Sun F, Huang L 2013
The C-terminus of Dpb2 is required for interaction with Pol2 and for cell viability. Isoz I, Persson U, Volkov K, Johansson E 2012
Evidence for lesion bypass by yeast replicative DNA polymerases during DNA damage. Sabouri N, Viberg J, Goyal DK, Johansson E, Chabes A 2008
PIP degron proteins, substrates of CRL4Cdt2, and not PIP boxes, interfere with DNA polymerase η and κ focus formation on UV damage. Tsanov N, Kermi C, Coulombe P, van der Laan S, Hodroj D, Maiorano D 2014
Nucleotide selection by the Y-family DNA polymerase Dpo4 involves template translocation and misalignment. Brenlla A, Markiewicz RP, Rueda D, Romano LJ 2014
Oxidative stress-induced mutagenesis in single-strand DNA occurs primarily at cytosines and is DNA polymerase zeta-dependent only for adenines and guanines. Degtyareva NP, Heyburn L, Sterling JF, Resnick MA, Gordenin DA, Doetsch PW 2013
Real-time single-molecule studies of the motions of DNA polymerase fingers illuminate DNA synthesis mechanisms. Evans GW, Hohlbein J, Craggs TD, Aigrain L, Kapanidis AN 2015
Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta. Boudsocq F, Iwai S, Hanaoka F, Woodgate R 2001

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